Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIC56_06050 | Not Available | Positive | 1217127 - 1217264 | 4898.22 |
| cytochrome c oxidase assembly protein | DIC56_06055 | Not Available | Positive | 1217283 - 1217891 | 22145.4 |
| cytochrome c oxidase subunit 3 | DIC56_06060 | Not Available | Positive | 1217949 - 1218827 | 33021.2 |
| chloramphenicol phosphotransferase | DIC56_06065 | Not Available | Negative | 1218885 - 1219508 | 22618.3 |
| hypothetical protein | DIC56_06070 | Not Available | Positive | 1219613 - 1219996 | 13776.0 |
| cytochrome c oxidase assembly protein | DIC56_06075 | Not Available | Positive | 1219989 - 1220723 | 26913.5 |
| duf1304 domain-containing protein | DIC56_06080 | Not Available | Positive | 1220809 - 1221174 | 13115.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DIC56_06085 | Not Available | Positive | 1221177 - 1222181 | 36345.3 |
| hypothetical protein | DIC56_06090 | Not Available | Positive | 1222405 - 1222665 | 9343.99 |
| homoserine kinase | DIC56_06095 | Not Available | Positive | 1222828 - 1223793 | 35569.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
