Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DIC56_06000 | Not Available | Negative | 1206453 - 1207907 | 50028.2 |
| short-chain dehydrogenase | DIC56_06005 | Not Available | Positive | 1208098 - 1208844 | 25694.6 |
| peptidase m15 | DIC56_06010 | Not Available | Positive | 1209055 - 1210356 | 45387.7 |
| pyrophosphatase | DIC56_06015 | Not Available | Positive | 1210446 - 1210751 | 11670.8 |
| voc family protein | DIC56_06020 | Not Available | Negative | 1210732 - 1211241 | 18795.1 |
| metalloprotease tldd | DIC56_06025 | Not Available | Negative | 1211169 - 1212584 | 49986.4 |
| invasion protein | DIC56_06030 | Not Available | Negative | 1212651 - 1213172 | 18427.5 |
| cytochrome c oxidase subunit ii | DIC56_06035 | Not Available | Positive | 1213500 - 1214384 | 32559.5 |
| cytochrome c oxidase subunit i | DIC56_06040 | Not Available | Positive | 1214403 - 1216088 | 61734.8 |
| protoheme ix farnesyltransferase | DIC56_06045 | Not Available | Positive | 1216171 - 1217127 | 33784.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
