Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate transporter | DIC56_05490 | Not Available | Positive | 1095378 - 1096604 | 44189.1 |
| bicarbonate-binding protein | DIC56_05495 | Not Available | Positive | 1096949 - 1098253 | 46673.1 |
| nitrate abc transporter, permease protein | DIC56_05500 | Not Available | Positive | 1098324 - 1099217 | 31792.3 |
| nitrate abc transporter atp-binding protein | DIC56_05505 | Not Available | Positive | 1099231 - 1100025 | 29357.9 |
| hemin receptor | DIC56_05510 | Not Available | Positive | 1100046 - 1100471 | 15058.1 |
| nitrite reductase large subunit | DIC56_05515 | Not Available | Positive | 1100477 - 1102927 | 88573.0 |
| nitrite reductase (nad(p)h) small subunit | DIC56_05520 | Not Available | Positive | 1102982 - 1103311 | 11774.2 |
| nitrate reductase | DIC56_05525 | Not Available | Positive | 1103339 - 1105993 | 94701.5 |
| uroporphyrinogen-iii c-methyltransferase | DIC56_05530 | Not Available | Positive | 1106022 - 1107692 | 58840.9 |
| iron-sulfur cluster carrier protein apbc | DIC56_05535 | Not Available | Positive | 1107789 - 1108916 | 39409.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
