Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DIC56_05390 | Not Available | Positive | 1073879 - 1074358 | 17814.9 |
| pp_01072 | DIC56_05395 | Not Available | Negative | 1074362 - 1074811 | Not Available |
| pseudouridine synthase | DIC56_05400 | Not Available | Positive | 1074880 - 1076811 | 71053.9 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | DIC56_05405 | Not Available | Positive | 1076792 - 1077352 | 20434.4 |
| patatin | DIC56_05410 | Not Available | Positive | 1077381 - 1078265 | 31539.2 |
| potassium transporter trka | DIC56_05415 | Not Available | Negative | 1078271 - 1080094 | 65123.3 |
| modulator protein | DIC56_05420 | Not Available | Positive | 1080207 - 1081553 | 47006.4 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | DIC56_05425 | Not Available | Positive | 1081603 - 1082397 | 28659.0 |
| duf4170 domain-containing protein | DIC56_05430 | Not Available | Positive | 1082460 - 1082708 | 9142.95 |
| 3-deoxy-d-manno-octulosonic acid transferase | DIC56_05435 | Not Available | Positive | 1082870 - 1084195 | 48836.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
