Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf305 domain-containing protein | DIC56_05290 | Not Available | Negative | 1053496 - 1053855 | 12921.6 |
| hypothetical protein | DIC56_05295 | Not Available | Negative | 1053931 - 1054290 | 12088.1 |
| histidine--trna ligase | DIC56_05300 | Not Available | Positive | 1054500 - 1056026 | 56596.6 |
| hypothetical protein | DIC56_05305 | Not Available | Positive | 1056077 - 1056283 | 7093.71 |
| atp phosphoribosyltransferase regulatory subunit | DIC56_05310 | Not Available | Positive | 1056297 - 1057418 | 40398.4 |
| atp phosphoribosyltransferase | DIC56_05315 | Not Available | Positive | 1057415 - 1058110 | 24902.9 |
| sam-dependent methyltransferase | DIC56_05320 | Not Available | Positive | 1058119 - 1058718 | 21813.9 |
| hypothetical protein | DIC56_05325 | Not Available | Negative | 1058805 - 1059254 | 15201.0 |
| hypothetical protein | DIC56_05330 | Not Available | Negative | 1059466 - 1059963 | 17813.2 |
| transcriptional regulator | DIC56_05335 | Not Available | Negative | 1060917 - 1062011 | 39400.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
