Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | DIC56_05090 | Not Available | Negative | 1015880 - 1017011 | 42183.3 |
| penicillin-binding protein | DIC56_05095 | Not Available | Negative | 1017109 - 1019565 | 88618.9 |
| n-acetylmuramoyl-l-alanine amidase | DIC56_05100 | Not Available | Negative | 1019821 - 1021011 | 43017.3 |
| ribonuclease e/g | DIC56_05105 | Not Available | Positive | 1021768 - 1024611 | 104646.0 |
| gnat family n-acetyltransferase | DIC56_05110 | Not Available | Negative | 1024695 - 1025252 | 20537.3 |
| 1-aminocyclopropane-1-carboxylate deaminase | DIC56_05115 | Not Available | Negative | 1025390 - 1026547 | 41660.0 |
| disulfide bond formation protein dsba | DIC56_05120 | Not Available | Positive | 1026753 - 1027514 | 27483.8 |
| type ii 3-dehydroquinate dehydratase | DIC56_05125 | Not Available | Positive | 1027645 - 1028082 | 15719.0 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | DIC56_05130 | Not Available | Positive | 1028105 - 1028572 | 16572.1 |
| acetyl-coa carboxylase biotin carboxylase subunit | DIC56_05135 | Not Available | Positive | 1028577 - 1029926 | 48805.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
