Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Rhizobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 28 |
| Temperature range | Not Available |
| Habitat | Borj cedria soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Vicia faba, Chlamydomonas reinhardtii, Chlorella vulgaris |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924860 bp
Thymine Count
928312 bp
Guanine Count
1472885 bp
Cytosine Count
1476731 bp
Genome Length
4808122 bp
Protein-coding Genes
4607 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DIC56_04990 | Not Available | Negative | 993085 - 993708 | 22738.3 |
| type iv secretory pathway protein acvb | DIC56_04995 | Not Available | Negative | 993876 - 995231 | 48484.8 |
| bifunctional lysylphosphatidylglycerol flippase/synthetase mprf | DIC56_05000 | Not Available | Negative | 995228 - 997840 | 94200.3 |
| aspartate kinase | DIC56_05005 | Not Available | Positive | 998134 - 999408 | 45282.2 |
| phosphoenolpyruvate--protein phosphotransferase | DIC56_05010 | Not Available | Positive | 999498 - 1001765 | 83756.7 |
| peptide chain release factor 1 | DIC56_05015 | Not Available | Positive | 1001788 - 1002867 | 39911.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | DIC56_05020 | Not Available | Positive | 1002864 - 1003742 | 31552.4 |
| duf4167 domain-containing protein | DIC56_05025 | Not Available | Positive | 1004071 - 1004700 | 22443.3 |
| atp-dependent chaperone clpb | DIC56_05030 | Not Available | Positive | 1004914 - 1007517 | 95545.3 |
| peptidase m24 | DIC56_05035 | Not Available | Negative | 1007603 - 1009555 | 70652.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Crown gall | Causes | PMC12602688 |
| Tumors | Causes | PMC12602688 |
| Hairy root diseases | Causes | PMC12602688 |
