MAG TPA_asm: Candidatus Sediminicultor tertius

Kingdom

Pseudomonadati

Phylum

Atribacterota

Class

Candidatus Phoenicimicrobiia

Order

Candidatus Pheonicimicrobiales

Family

Candidatus Phoenicimicrobiaceae

Genus

Candidatus Sediminicultor

Description

Candidatus Sediminicultor tertius is a notable member of the microbial community characterized by its single replicon, indicating a streamlined genomic organization. The complete genome of this organism is cataloged under the accession number DPXH00000000.1, facilitating its identification and further study within microbiological research. The designation "Candidatus" suggests that this species has not yet been cultivated in laboratory conditions, which is common for many environmental microbes. As such, much of its ecological role remains to be elucidated through metagenomic studies and bioinformatics analyses. Understanding the ecological implications of Candidatus Sediminicultor tertius could provide insights into its function within sedimentary environments. Members of the Sediminicultor genus are typically associated with sedimentary ecosystems where they may play roles in nutrient cycling and organic matter degradation. Their presence could influence biogeochemical processes in these habitats, including the breakdown of complex organic compounds and the recycling of nutrients, which is essential for maintaining ecosystem health. Thus, the study of Candidatus Sediminicultor tertius not only contributes to our knowledge of microbial diversity but also highlights the significance of sediment-dwelling microorganisms in ecological networks, emphasizing their potential contributions to sediment stability and nutrient dynamics. Further research is needed to fully uncover the biological and ecological roles of this organism in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumAtribacterota
ClassCandidatus Phoenicimicrobiia
OrderCandidatus Pheonicimicrobiales
FamilyCandidatus Phoenicimicrobiaceae
GenusCandidatus Sediminicultor
SpeciesCandidatus Sediminicultor tertius
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Candidatus Sediminicultor tertius isolate UBA9311

Gene Summary

Adenine Count

458264 bp

Thymine Count

459867 bp

Guanine Count

244335 bp

Cytosine Count

245846 bp

Genome Length

1468635 bp

Protein-coding Genes

1449 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional metallophosphatase/5'-nucleotidaseDHW70_00750Not AvailableNegative148875 - 15082472462.3
peptide abc transporter permeaseDHW70_00755Not AvailableNegative151001 - 15221843809.7
macrolide abc transporter atp-binding proteinDHW70_00760Not AvailableNegative152215 - 15289225170.9
efflux rnd transporter periplasmic adaptor subunitDHW70_00765Not AvailableNegative152929 - 1530574498.38
hypothetical proteinDHW70_00770Not AvailableNegative153487 - 15378911658.0
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp pyrophosphataseDHW70_00775Not AvailableNegative154030 - 15474927463.3
imidazole glycerol phosphate synthase subunit hisfDHW70_00780Not AvailableNegative154742 - 15553329101.3
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseDHW70_00785Not AvailableNegative155822 - 15655026925.3
imidazole glycerol phosphate synthase subunit hishDHW70_00790Not AvailableNegative156544 - 15716723328.2
imidazoleglycerol-phosphate dehydratase hisbDHW70_00795Not AvailableNegative157293 - 15791023568.5

Displaying genes 151 – 160 of 1491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.