MAG TPA_asm: Candidatus Sediminicultor tertius

Kingdom

Pseudomonadati

Phylum

Atribacterota

Class

Candidatus Phoenicimicrobiia

Order

Candidatus Pheonicimicrobiales

Family

Candidatus Phoenicimicrobiaceae

Genus

Candidatus Sediminicultor

Description

Candidatus Sediminicultor tertius is a notable member of the microbial community characterized by its single replicon, indicating a streamlined genomic organization. The complete genome of this organism is cataloged under the accession number DPXH00000000.1, facilitating its identification and further study within microbiological research. The designation "Candidatus" suggests that this species has not yet been cultivated in laboratory conditions, which is common for many environmental microbes. As such, much of its ecological role remains to be elucidated through metagenomic studies and bioinformatics analyses. Understanding the ecological implications of Candidatus Sediminicultor tertius could provide insights into its function within sedimentary environments. Members of the Sediminicultor genus are typically associated with sedimentary ecosystems where they may play roles in nutrient cycling and organic matter degradation. Their presence could influence biogeochemical processes in these habitats, including the breakdown of complex organic compounds and the recycling of nutrients, which is essential for maintaining ecosystem health. Thus, the study of Candidatus Sediminicultor tertius not only contributes to our knowledge of microbial diversity but also highlights the significance of sediment-dwelling microorganisms in ecological networks, emphasizing their potential contributions to sediment stability and nutrient dynamics. Further research is needed to fully uncover the biological and ecological roles of this organism in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumAtribacterota
ClassCandidatus Phoenicimicrobiia
OrderCandidatus Pheonicimicrobiales
FamilyCandidatus Phoenicimicrobiaceae
GenusCandidatus Sediminicultor
SpeciesCandidatus Sediminicultor tertius
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Candidatus Sediminicultor tertius isolate UBA9311

Gene Summary

Adenine Count

458264 bp

Thymine Count

459867 bp

Guanine Count

244335 bp

Cytosine Count

245846 bp

Genome Length

1468635 bp

Protein-coding Genes

1449 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhomboid family intramembrane serine proteaseDHW70_07330Not AvailableNegative1430181 - 143085524927.6
udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing)DHW70_07335Not AvailableNegative1431592 - 143274944349.0
cytidine deaminaseDHW70_07340Not AvailableNegative1432742 - 143318516533.4
uracil phosphoribosyltransferaseDHW70_07345Not AvailableNegative1433409 - 143403823153.7
ribose 5-phosphate isomerase bDHW70_07350Not AvailableNegative1434097 - 143454916855.4
low molecular weight protein arginine phosphataseDHW70_07355Not AvailableNegative1434567 - 143507019143.1
peptide chain release factor n(5)-glutamine methyltransferaseDHW70_07365Not AvailableNegative1435554 - 143646535051.1
peptide chain release factor 1DHW70_07370Not AvailableNegative1436455 - 143751340214.2
duf1385 domain-containing proteinDHW70_07375Not AvailableNegative1437506 - 143840834132.7
fad-dependent thymidylate synthaseDHW70_07380Not AvailableNegative1438411 - 143910626222.3

Displaying genes 1451 – 1460 of 1491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.