MAG TPA_asm: Paracoccaceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

MAG TPA_asm, classified within the Paracoccaceae family, is a bacterium that inhabits marine environments. This organism is characterized by having two replicons, which may indicate a complex genomic structure that can aid in its adaptability and functionality within its ecological niche. The genomic data for MAG TPA_asm is cataloged under the accessions DPOI00000000.1 and DQCI00000000.1, which serve as identifiers for further research and analysis. The marine habitat of this bacterium suggests that it may play a role in the biogeochemical cycles of marine ecosystems, potentially influencing nutrient dynamics and interactions with other microbial communities. Understanding the characteristics of MAG TPA_asm enhances our insight into the diversity of marine microbiomes and their functions. The presence of multiple replicons might contribute to the bacterium’s ability to thrive in varying environmental conditions, underscoring the complexity of microbial life in oceanic habitats. Further studies could elucidate the specific roles and interactions of this bacterium in marine ecosystems, highlighting its potential contributions to ecological processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Paracoccaceae bacterium isolate UBA9292 contig_34785,

Gene Summary

Adenine Count

728744 bp

Thymine Count

729896 bp

Guanine Count

1419885 bp

Cytosine Count

1415190 bp

Genome Length

4348554 bp

Protein-coding Genes

4052 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripartite tricarboxylate transporter substrate binding proteinDHC76_00140Not AvailableNegative26064 - 2703233644.6
tripartite tricarboxylate transporter tctb family proteinDHC76_00145Not AvailableNegative27087 - 2755117018.1
c4-dicarboxylate abc transporter permeaseDHC76_00150Not AvailableNegative27554 - 2908052750.6
laci family dna-binding transcriptional regulatorDHC76_00155Not AvailablePositive29181 - 3020936934.5
c4-dicarboxylate abc transporter substrate-binding proteinDHC76_00160Not AvailablePositive30291 - 3130136373.9
trap transporter small permeaseDHC76_00165Not AvailablePositive31381 - 3201022840.5
trap transporter large permeaseDHC76_00170Not AvailablePositive32010 - 3340749604.5
glycerol kinaseDHC76_00175Not AvailablePositive33462 - 3494653627.6
thymidylate synthaseDHC76_00180Not AvailablePositive34988 - 3578529794.6
dihydrofolate reductaseDHC76_00185Not AvailablePositive35789 - 3626517665.3

Displaying genes 4131 – 4140 of 8214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.