MAG TPA_asm: Paracoccaceae bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

MAG TPA_asm, classified within the Paracoccaceae family, is a bacterium that inhabits marine environments. This organism is characterized by having two replicons, which may indicate a complex genomic structure that can aid in its adaptability and functionality within its ecological niche. The genomic data for MAG TPA_asm is cataloged under the accessions DPOI00000000.1 and DQCI00000000.1, which serve as identifiers for further research and analysis. The marine habitat of this bacterium suggests that it may play a role in the biogeochemical cycles of marine ecosystems, potentially influencing nutrient dynamics and interactions with other microbial communities. Understanding the characteristics of MAG TPA_asm enhances our insight into the diversity of marine microbiomes and their functions. The presence of multiple replicons might contribute to the bacterium’s ability to thrive in varying environmental conditions, underscoring the complexity of microbial life in oceanic habitats. Further studies could elucidate the specific roles and interactions of this bacterium in marine ecosystems, highlighting its potential contributions to ecological processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Paracoccaceae bacterium isolate UBA9292 contig_34785,

Gene Summary

Adenine Count

728744 bp

Thymine Count

729896 bp

Guanine Count

1419885 bp

Cytosine Count

1415190 bp

Genome Length

4348554 bp

Protein-coding Genes

4052 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinDIU07_20630Not AvailableNegative4008586 - 400929625432.9
abc transporter substrate-binding proteinDIU07_20635Not AvailableNegative4009310 - 401046139075.3
rpir family transcriptional regulatorDIU07_20645Not AvailablePositive4012396 - 401324431319.2
glutamine synthetaseDIU07_20650Not AvailablePositive4013241 - 401455146309.0
abc transporter permeaseDIU07_20660Not AvailableNegative4015481 - 401624826889.5
hypothetical proteinDIU07_20670Not AvailablePositive4018437 - 401885914257.6
hypothetical proteinDIU07_20675Not AvailableNegative4019183 - 401979422564.6
peptidase m52DIU07_20680Not AvailablePositive4020165 - 402067117427.0
hydrogenase expression protein huphDIU07_20685Not AvailablePositive4020762 - 402121715770.7
ni/fe hydrogenaseDIU07_20690Not AvailablePositive4021248 - 402234238551.0

Displaying genes 3781 – 3790 of 8214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.