MAG TPA_asm: Rheinheimera sp.

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera sp. MAG TPA_asm is a Gram-negative bacterium characterized by its rod shape. This microbial species was identified in a unique habitat—nasal discharge—suggesting a potential association with the nasal microbiome of its host. The organism is notable for having a single replicon, which indicates a streamlined genetic architecture that may contribute to its adaptability in the nasal environment. The accession number for Rheinheimera sp. is DPJG00000000.1, which can be used for further genomic analysis and identification in scientific databases. The presence of Rheinheimera sp. in nasal discharge highlights the importance of microbial diversity in the nasal cavity, which plays a crucial role in maintaining respiratory health and preventing colonization by pathogenic organisms. Understanding the specific role of this bacterium in the nasal microbiome can provide insights into its ecological interactions and potential contributions to the overall health of the host.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of MAG TPA_asm: Rheinheimera sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnasal discharge
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Rheinheimera sp. isolate UBA8519 contig_160718, whole

Gene Summary

Adenine Count

1002066 bp

Thymine Count

1020411 bp

Guanine Count

1001472 bp

Cytosine Count

968023 bp

Genome Length

3991986 bp

Protein-coding Genes

3455 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c1DF774_01870Not AvailableNegative405413 - 40615327559.2
cytochrome bDF774_01875Not AvailableNegative406153 - 40742748730.4
ubiquinol-cytochrome c reductase iron-sulfur subunitDF774_01880Not AvailableNegative407427 - 40801721057.3
30s ribosomal protein s9DF774_01885Not AvailableNegative408509 - 40890114692.1
50s ribosomal protein l13DF774_01890Not AvailableNegative408917 - 40934515821.3
cell division protein zapeDF774_01895Not AvailableNegative409554 - 41064542171.6
duf1043 domain-containing proteinDF774_01900Not AvailablePositive410774 - 41122917529.9
serine endoprotease degqDF774_01905Not AvailablePositive411288 - 41264947467.4
outer membrane-stress sensor serine endopeptidase degsDF774_01910Not AvailablePositive412787 - 41387538995.0
udp-n-acetylglucosamine 1-carboxyvinyltransferaseDF774_01915Not AvailableNegative414043 - 41530544620.3

Displaying genes 461 – 470 of 1687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.