MAG TPA_asm: Psychrobacter sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. MAG TPA_asm is a notable bacterium characterized by its habitat, presence of flagella, and genetic structure. This organism is found in unique environments, specifically on plastic pieces under gravel and on skin surfaces, suggesting its adaptability to diverse and potentially anthropogenic habitats. The presence of flagella indicates that Psychrobacter sp. possesses the ability to move, which may facilitate its colonization of various surfaces, including those associated with human activity. This motility could play a significant role in its ecological interactions, particularly in environments where competition for resources is prevalent. Genetically, Psychrobacter sp. is distinguished by having two replicons, which may reflect its complex genetic regulation and adaptability. The sequenced accessions, DPFN00000000.1 and DPSK00000000.1, provide a basis for further genomic studies that could elucidate the metabolic pathways and stress responses of this bacterium. In summary, the adaptability of Psychrobacter sp. to environments influenced by human activity, coupled with its motility and genetic complexity, suggests that it may play a role in the biodegradation of plastic materials in aquatic systems. This highlights the ecological significance of such microorganisms in addressing environmental challenges related to plastic pollution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatplastic pieces under gravel; skin
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Psychrobacter sp. isolate UBA11262 contig_4519, whole

Gene Summary

Adenine Count

950132 bp

Thymine Count

952756 bp

Guanine Count

713865 bp

Cytosine Count

707694 bp

Genome Length

3324835 bp

Protein-coding Genes

2692 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDEV38_07600Not AvailablePositive1751604 - 17518228287.8
c4-dicarboxylate abc transporter substrate-binding proteinDEV38_07610Not AvailablePositive1752581 - 175363937754.5
c4-dicarboxylate abc transporter permeaseDEV38_07615Not AvailablePositive1753657 - 175418419416.4
c4-dicarboxylate abc transporter permeaseDEV38_07620Not AvailablePositive1754181 - 175547045206.0
5'-nucleotidaseDEV38_07625Not AvailablePositive1755675 - 175670037702.9
rhomboid family intramembrane serine proteaseDEV38_07630Not AvailablePositive1756909 - 175751121839.5
hypothetical proteinDEV38_07635Not AvailableNegative1757526 - 175807420592.1
cation acetate symporterDEV38_07640Not AvailableNegative1758312 - 176018065818.2
duf4212 domain-containing proteinDEV38_07645Not AvailableNegative1760184 - 17604449799.99
sodium:alanine symporter family proteinDEV38_07650Not AvailablePositive1761148 - 176264453797.5

Displaying genes 4221 – 4230 of 5064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.