MAG TPA_asm: Psychrobacter sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. MAG TPA_asm is a notable bacterium characterized by its habitat, presence of flagella, and genetic structure. This organism is found in unique environments, specifically on plastic pieces under gravel and on skin surfaces, suggesting its adaptability to diverse and potentially anthropogenic habitats. The presence of flagella indicates that Psychrobacter sp. possesses the ability to move, which may facilitate its colonization of various surfaces, including those associated with human activity. This motility could play a significant role in its ecological interactions, particularly in environments where competition for resources is prevalent. Genetically, Psychrobacter sp. is distinguished by having two replicons, which may reflect its complex genetic regulation and adaptability. The sequenced accessions, DPFN00000000.1 and DPSK00000000.1, provide a basis for further genomic studies that could elucidate the metabolic pathways and stress responses of this bacterium. In summary, the adaptability of Psychrobacter sp. to environments influenced by human activity, coupled with its motility and genetic complexity, suggests that it may play a role in the biodegradation of plastic materials in aquatic systems. This highlights the ecological significance of such microorganisms in addressing environmental challenges related to plastic pollution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatplastic pieces under gravel; skin
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Psychrobacter sp. isolate UBA11262 contig_4519, whole

Gene Summary

Adenine Count

950132 bp

Thymine Count

952756 bp

Guanine Count

713865 bp

Cytosine Count

707694 bp

Genome Length

3324835 bp

Protein-coding Genes

2692 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna pseudouridine(38-40) synthase truaDEV38_06520Not AvailableNegative1534172 - 153501131281.3
l-asparaginase 1DEV38_06525Not AvailableNegative1535076 - 153616139586.2
pilus assembly protein fimvDEV38_06530Not AvailableNegative1536376 - 153802559171.0
peptigoglycan-binding protein lysmDEV38_06535Not AvailableNegative1538077 - 153993064848.1
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaDEV38_06540Not AvailableNegative1540054 - 154126844682.1
dna polymerase ivDEV38_06545Not AvailableNegative1541499 - 154258440129.4
alanine racemaseDEV38_06550Not AvailablePositive1543066 - 154417539645.5
ornithine carbamoyltransferaseDEV38_06555Not AvailablePositive1544447 - 154537034742.5
ribose 5-phosphate isomerase aDEV38_06560Not AvailableNegative1545515 - 154617423328.9
arsenical efflux pump membrane protein arsbDEV38_06565Not AvailableNegative1546328 - 154763846240.9

Displaying genes 4041 – 4050 of 5064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.