MAG TPA_asm: Psychrobacter sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. MAG TPA_asm is a notable bacterium characterized by its habitat, presence of flagella, and genetic structure. This organism is found in unique environments, specifically on plastic pieces under gravel and on skin surfaces, suggesting its adaptability to diverse and potentially anthropogenic habitats. The presence of flagella indicates that Psychrobacter sp. possesses the ability to move, which may facilitate its colonization of various surfaces, including those associated with human activity. This motility could play a significant role in its ecological interactions, particularly in environments where competition for resources is prevalent. Genetically, Psychrobacter sp. is distinguished by having two replicons, which may reflect its complex genetic regulation and adaptability. The sequenced accessions, DPFN00000000.1 and DPSK00000000.1, provide a basis for further genomic studies that could elucidate the metabolic pathways and stress responses of this bacterium. In summary, the adaptability of Psychrobacter sp. to environments influenced by human activity, coupled with its motility and genetic complexity, suggests that it may play a role in the biodegradation of plastic materials in aquatic systems. This highlights the ecological significance of such microorganisms in addressing environmental challenges related to plastic pollution.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatplastic pieces under gravel; skin
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Psychrobacter sp. isolate UBA11262 contig_4519, whole

Gene Summary

Adenine Count

950132 bp

Thymine Count

952756 bp

Guanine Count

713865 bp

Cytosine Count

707694 bp

Genome Length

3324835 bp

Protein-coding Genes

2692 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fe/s-dependent 2-methylisocitrate dehydratase acndDEV38_04480Not AvailablePositive1040161 - 104280096564.7
type ii toxin-antitoxin system prevent-host-death family antitoxinDEV38_04485Not AvailablePositive1042953 - 104326411347.0
txe/yoeb family addiction module toxinDEV38_04490Not AvailablePositive1043285 - 104354510377.3
2-methylaconitate cis-trans isomerase prpfDEV38_04495Not AvailablePositive1043787 - 104503744022.2
abc transporterDEV38_04500Not AvailablePositive1045082 - 104693569264.8
gnat family n-acetyltransferaseDEV38_04505Not AvailablePositive1047092 - 104771223213.4
short chain dehydrogenaseDEV38_04515Not AvailableNegative1047970 - 104874628544.1
duf2868 domain-containing proteinDEV38_04520Not AvailablePositive1049005 - 105037251106.3
duf3482 domain-containing proteinDEV38_04525Not AvailablePositive1050439 - 105205258823.3
arsenic-transporting atpaseDEV38_04530Not AvailableNegative1052057 - 105309738103.6

Displaying genes 3641 – 3650 of 5064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.