MAG TPA_asm: Desulfobacter sp.

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Desulfobacter

Description

Desulfobacter sp. MAG TPA_asm is a single-replicon microbial genome identified from environmental samples. Its genomic data is cataloged under the accession number DOMX00000000.1. Desulfobacter species are known for their ability to reduce sulfate, playing a significant role in the sulfur cycle, particularly in anoxic environments. This metabolic capability suggests that Desulfobacter sp. contributes to the degradation of organic matter and the recycling of nutrients in ecosystems where sulfate is present, such as marine sediments and freshwater systems. The presence of a single replicon indicates a streamlined genome organization, which may contribute to the organism's adaptability in various environments. This genomic structure can facilitate efficient replication and maintenance of essential functions, allowing Desulfobacter sp. to thrive in competitive microbial communities. Overall, the ecological significance of Desulfobacter sp. lies in its role as a sulfate-reducing bacterium, which is central to biogeochemical cycles and nutrient dynamics in its habitat. Its metabolic processes are key to maintaining ecosystem health and sustainability, particularly in environments where organic matter is abundant and oxygen is limited. Understanding the specific functions and interactions of Desulfobacter sp. can enhance our knowledge of microbial ecology and the intricate relationships within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobacteria
OrderDesulfobacterales
FamilyDesulfobacteraceae
GenusDesulfobacter
SpeciesDesulfobacter sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Desulfobacter sp. isolate UBA12168 contig_364, whole

Gene Summary

Adenine Count

1032044 bp

Thymine Count

1026495 bp

Guanine Count

921469 bp

Cytosine Count

938105 bp

Genome Length

3918761 bp

Protein-coding Genes

3312 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal-dependent hydrolaseDEB50_01260Not AvailablePositive271030 - 27167123763.8
eama/rhat family transporterDEB50_01265Not AvailableNegative271687 - 27259533151.0
signal transduction proteinDEB50_01270Not AvailableNegative273018 - 27490171564.8
hypothetical proteinDEB50_01275Not AvailablePositive275610 - 280517186340.0
copg family transcriptional regulatorDEB50_01280Not AvailablePositive280711 - 2809539211.08
mazf family transcriptional regulatorDEB50_01285Not AvailablePositive280938 - 28127612270.1
ggdef domain-containing proteinDEB50_01300Not AvailablePositive283810 - 28622190369.4
hypothetical proteinDEB50_01305Not AvailableNegative286226 - 28660013940.8
1,4-alpha-glucan-branching enzymeDEB50_01310Not AvailablePositive286698 - 28832362182.5
glycogen phosphorylaseDEB50_01315Not AvailableNegative288430 - 29086892999.7

Displaying genes 241 – 250 of 3360 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.