MAG TPA_asm: Desulfobacter sp.

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Desulfobacter

Description

Desulfobacter sp. MAG TPA_asm is a single-replicon microbial genome identified from environmental samples. Its genomic data is cataloged under the accession number DOMX00000000.1. Desulfobacter species are known for their ability to reduce sulfate, playing a significant role in the sulfur cycle, particularly in anoxic environments. This metabolic capability suggests that Desulfobacter sp. contributes to the degradation of organic matter and the recycling of nutrients in ecosystems where sulfate is present, such as marine sediments and freshwater systems. The presence of a single replicon indicates a streamlined genome organization, which may contribute to the organism's adaptability in various environments. This genomic structure can facilitate efficient replication and maintenance of essential functions, allowing Desulfobacter sp. to thrive in competitive microbial communities. Overall, the ecological significance of Desulfobacter sp. lies in its role as a sulfate-reducing bacterium, which is central to biogeochemical cycles and nutrient dynamics in its habitat. Its metabolic processes are key to maintaining ecosystem health and sustainability, particularly in environments where organic matter is abundant and oxygen is limited. Understanding the specific functions and interactions of Desulfobacter sp. can enhance our knowledge of microbial ecology and the intricate relationships within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobacteria
OrderDesulfobacterales
FamilyDesulfobacteraceae
GenusDesulfobacter
SpeciesDesulfobacter sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Desulfobacter sp. isolate UBA12168 contig_364, whole

Gene Summary

Adenine Count

1032044 bp

Thymine Count

1026495 bp

Guanine Count

921469 bp

Cytosine Count

938105 bp

Genome Length

3918761 bp

Protein-coding Genes

3312 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rod shape-determining protein mrecDEB50_00905Not AvailableNegative185212 - 18600629190.5
rod shape-determining proteinDEB50_00910Not AvailableNegative186030 - 18707637141.6
serine hydrolaseDEB50_00915Not AvailableNegative187205 - 18832340968.6
ld-carboxypeptidaseDEB50_00920Not AvailableNegative188320 - 18922532129.0
hypothetical proteinDEB50_00925Not AvailablePositive189574 - 18984310406.4
hypothetical proteinDEB50_00930Not AvailablePositive190043 - 19064221808.8
cupin domain-containing proteinDEB50_00935Not AvailableNegative190671 - 19099411892.1
peptidase u32DEB50_00940Not AvailablePositive191132 - 19312974139.7
sigma-54-dependent fis family transcriptional regulatorDEB50_00945Not AvailablePositive193151 - 19457553391.9
hypothetical proteinDEB50_00950Not AvailablePositive194580 - 19494213657.6

Displaying genes 171 – 180 of 3360 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.