MAG TPA_asm: Chryseobacterium sp.

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium sp. MAG TPA_asm is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism has been identified in aquatic environments and soil, indicating its adaptability to various ecological niches. The strain possesses two replicons, which may contribute to its genetic diversity and metabolic versatility. The habitat of Chryseobacterium sp. suggests its potential role in nutrient cycling within aquatic and terrestrial ecosystems. As a member of the Chryseobacterium genus, it is likely involved in the decomposition of organic matter, which is crucial for soil health and the maintenance of aquatic ecosystems. The presence of this bacterium in both soil and water highlights its ecological significance, as it may facilitate the transfer of nutrients and energy across these interconnected environments. The genomic information available for Chryseobacterium sp. MAG TPA_asm, with accessions DOHX00000000.1 and DQAC00000000.1, provides a foundation for further exploration of its metabolic pathways and environmental interactions. Overall, the characteristics of this bacterium underscore its importance in ecological processes and its potential applications in biotechnology or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataquatic origin; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Chryseobacterium sp. isolate UBA10733 contig_1965,

Gene Summary

Adenine Count

842362 bp

Thymine Count

837642 bp

Guanine Count

529614 bp

Cytosine Count

530228 bp

Genome Length

2740301 bp

Protein-coding Genes

2475 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinDIT10_17965Not AvailableNegative3845062 - 384668759396.9
susc/raga family tonb-linked outer membrane proteinDIT10_17970Not AvailableNegative3846700 - 3849558105128.0
hypothetical proteinDIT10_17975Not AvailablePositive3849985 - 385066525475.2
translation initiation factor if-2DIT10_17980Not AvailableNegative3850750 - 3853716108245.0
transcription termination/antitermination protein nusaDIT10_17985Not AvailableNegative3853793 - 385502847196.3
ribosome assembly cofactor rimpDIT10_17990Not AvailableNegative3855046 - 385551317767.3
udp-glucose 6-dehydrogenaseDIT10_17995Not AvailablePositive3855729 - 385704248613.2
dtdp-glucose 4,6-dehydrataseDIT10_18000Not AvailablePositive3857047 - 385812640883.9
glucose-1-phosphate thymidylyltransferaseDIT10_18005Not AvailablePositive3858257 - 385912031642.0
abc transporter permeaseDIT10_18010Not AvailablePositive3859294 - 386014232218.2

Displaying genes 6021 – 6030 of 7307 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.