MAG TPA_asm: Chryseobacterium sp.

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium sp. MAG TPA_asm is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism has been identified in aquatic environments and soil, indicating its adaptability to various ecological niches. The strain possesses two replicons, which may contribute to its genetic diversity and metabolic versatility. The habitat of Chryseobacterium sp. suggests its potential role in nutrient cycling within aquatic and terrestrial ecosystems. As a member of the Chryseobacterium genus, it is likely involved in the decomposition of organic matter, which is crucial for soil health and the maintenance of aquatic ecosystems. The presence of this bacterium in both soil and water highlights its ecological significance, as it may facilitate the transfer of nutrients and energy across these interconnected environments. The genomic information available for Chryseobacterium sp. MAG TPA_asm, with accessions DOHX00000000.1 and DQAC00000000.1, provides a foundation for further exploration of its metabolic pathways and environmental interactions. Overall, the characteristics of this bacterium underscore its importance in ecological processes and its potential applications in biotechnology or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataquatic origin; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Chryseobacterium sp. isolate UBA10733 contig_1965,

Gene Summary

Adenine Count

842362 bp

Thymine Count

837642 bp

Guanine Count

529614 bp

Cytosine Count

530228 bp

Genome Length

2740301 bp

Protein-coding Genes

2475 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tolc family proteinDIT10_14705Not AvailablePositive3113934 - 311523249490.3
mfs sugar transporterDIT10_14710Not AvailablePositive3115469 - 311669242530.7
hypothetical proteinDIT10_14715Not AvailablePositive3116886 - 311720011942.0
hypothetical proteinDIT10_14720Not AvailablePositive3117175 - 311820638691.8
ligase-associated dna damage response endonuclease pdemDIT10_14725Not AvailableNegative3118323 - 311896724388.5
2,3-bisphosphoglycerate-dependent phosphoglycerate mutaseDIT10_14730Not AvailableNegative3119056 - 311965822778.3
ligase-associated dna damage response dexh box helicaseDIT10_14735Not AvailableNegative3119784 - 312223492827.7
atp-dependent dna ligaseDIT10_14740Not AvailableNegative3122236 - 312381660801.9
ligase-associated dna damage response exonucleaseDIT10_14745Not AvailableNegative3123813 - 312483538209.9
short-chain dehydrogenaseDIT10_14750Not AvailablePositive3125151 - 312594228940.6

Displaying genes 5381 – 5390 of 7307 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.