MAG TPA_asm: Chryseobacterium sp.

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium sp. MAG TPA_asm is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism has been identified in aquatic environments and soil, indicating its adaptability to various ecological niches. The strain possesses two replicons, which may contribute to its genetic diversity and metabolic versatility. The habitat of Chryseobacterium sp. suggests its potential role in nutrient cycling within aquatic and terrestrial ecosystems. As a member of the Chryseobacterium genus, it is likely involved in the decomposition of organic matter, which is crucial for soil health and the maintenance of aquatic ecosystems. The presence of this bacterium in both soil and water highlights its ecological significance, as it may facilitate the transfer of nutrients and energy across these interconnected environments. The genomic information available for Chryseobacterium sp. MAG TPA_asm, with accessions DOHX00000000.1 and DQAC00000000.1, provides a foundation for further exploration of its metabolic pathways and environmental interactions. Overall, the characteristics of this bacterium underscore its importance in ecological processes and its potential applications in biotechnology or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataquatic origin; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Chryseobacterium sp. isolate UBA10733 contig_1965,

Gene Summary

Adenine Count

842362 bp

Thymine Count

837642 bp

Guanine Count

529614 bp

Cytosine Count

530228 bp

Genome Length

2740301 bp

Protein-coding Genes

2475 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysine--trna ligaseDIT10_00400Not AvailableNegative90306 - 9200364638.5
23s rrna (adenine(1618)-n(6))-methyltransferase rlmfDIT10_00405Not AvailableNegative92344 - 9324634352.3
cytochrome cDIT10_00410Not AvailableNegative93250 - 9362413215.9
hypothetical proteinDIT10_00415Not AvailableNegative93624 - 938427320.77
cupinDIT10_00420Not AvailablePositive94022 - 9447716559.6
hypothetical proteinDIT10_00425Not AvailablePositive94556 - 9520024709.9
anthranilate synthase component iDIT10_00430Not AvailablePositive95451 - 9687553809.3
aminodeoxychorismate/anthranilate synthase component iiDIT10_00435Not AvailablePositive96909 - 9750822176.5
anthranilate phosphoribosyltransferaseDIT10_00440Not AvailablePositive97547 - 9853336270.4
indole-3-glycerol phosphate synthase trpcDIT10_00445Not AvailablePositive98579 - 9935228957.7

Displaying genes 2591 – 2600 of 7307 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.