MAG TPA_asm: Chryseobacterium sp.

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium sp. MAG TPA_asm is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism has been identified in aquatic environments and soil, indicating its adaptability to various ecological niches. The strain possesses two replicons, which may contribute to its genetic diversity and metabolic versatility. The habitat of Chryseobacterium sp. suggests its potential role in nutrient cycling within aquatic and terrestrial ecosystems. As a member of the Chryseobacterium genus, it is likely involved in the decomposition of organic matter, which is crucial for soil health and the maintenance of aquatic ecosystems. The presence of this bacterium in both soil and water highlights its ecological significance, as it may facilitate the transfer of nutrients and energy across these interconnected environments. The genomic information available for Chryseobacterium sp. MAG TPA_asm, with accessions DOHX00000000.1 and DQAC00000000.1, provides a foundation for further exploration of its metabolic pathways and environmental interactions. Overall, the characteristics of this bacterium underscore its importance in ecological processes and its potential applications in biotechnology or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataquatic origin; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Chryseobacterium sp. isolate UBA10733 contig_1965,

Gene Summary

Adenine Count

842362 bp

Thymine Count

837642 bp

Guanine Count

529614 bp

Cytosine Count

530228 bp

Genome Length

2740301 bp

Protein-coding Genes

2475 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formyltetrahydrofolate deformylaseDD740_07470Not AvailableNegative1574164 - 157499431613.6
translational gtpase typaDD740_07475Not AvailableNegative1575060 - 157686867492.1
c-type cytochrome biogenesis protein ccsbDD740_07480Not AvailableNegative1577108 - 1580353122279.0
protein-disulfide reductaseDD740_07485Not AvailableNegative1580577 - 158264376567.7
thioredoxinDD740_07490Not AvailablePositive1582886 - 158438255827.0
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdDD740_07495Not AvailablePositive1584391 - 158579753203.8
hypothetical proteinDD740_07500Not AvailablePositive1585822 - 158629217610.1
hypothetical proteinDD740_07505Not AvailablePositive1586258 - 158692624753.6
signal peptide peptidase sppaDD740_07510Not AvailableNegative1587005 - 158875364514.2
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseDD740_07515Not AvailablePositive1588777 - 158919315902.6

Displaying genes 1451 – 1460 of 7307 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.