MAG TPA_asm: Halomonas sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Halomonas

Description

MAG TPA_asm represents a strain of Halomonas sp., a Gram-negative bacterium identified in a denitrification bioreactor within a marine habitat. This organism is characterized by the presence of flagella, which suggests an ability to actively move in its environment, potentially facilitating its role in biogeochemical processes. Halomonas sp. has been observed to associate with specific hosts, including Salicornia rubra, Salicornia utahensis, and Allenrolfea occidentalis. These host plants are often found in saline environments, indicating that Halomonas sp. is likely adapted to thrive in high-salinity conditions, which is a common trait among members of the Halomonas genus. The genomic analysis of MAG TPA_asm reveals that it contains two replicons, which may reflect its genetic adaptability and potential for horizontal gene transfer. This feature could enhance its survival and functionality in its ecological niche, particularly in bioreactor systems designed for denitrification, where efficient nutrient cycling is crucial. In summary, Halomonas sp. exhibits traits that enable it to play a significant role in marine denitrification processes, potentially contributing to the reduction of nitrogen compounds in saline environments. Its interactions with halophytic plants further underscore its ecological importance in maintaining the balance of nutrient cycles in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusHalomonas
SpeciesHalomonas sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of MAG TPA_asm: Halomonas sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdenitritation bioreactor; Marine
Biotic relationshipNot Available
Host(s)Salicornia rubra, Salicornia utahensis, Allenrolfea occidentalis
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Halomonas sp. isolate UBA10374 contig_24160, whole

Gene Summary

Adenine Count

630045 bp

Thymine Count

631372 bp

Guanine Count

835926 bp

Cytosine Count

829286 bp

Genome Length

3113950 bp

Protein-coding Genes

3544 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Portal proteinDD685_13745Not AvailableNegative2245132 - 224634344185.1
Hypothetical proteinDD685_13750Not AvailableNegative2246511 - 224697416777.6
Putative terl large-subunit terminaseDD685_13755Not AvailableNegative2247111 - 224808437077.1
Terminase small subunitDD685_13760Not AvailableNegative2248161 - 224873621944.1
Hypothetical proteinDD685_13765Not AvailableNegative2248908 - 22491629260.03
Putative holinDD685_13770Not AvailableNegative2249375 - 22496088702.84
hypothetical proteinDD685_13775Not AvailableNegative2249605 - 224998214488.5
hypothetical proteinDD685_13780Not AvailableNegative2249979 - 225031711689.4
hypothetical proteinDD685_13785Not AvailableNegative2250328 - 225064511663.5
Putative lytic transglycosylaseDD685_13790Not AvailableNegative2250635 - 225094811757.1

Displaying genes 21 – 30 of 6918 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.