MAG TPA_asm: Halomonas sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Halomonadaceae

Genus

Halomonas

Description

MAG TPA_asm represents a strain of Halomonas sp., a Gram-negative bacterium identified in a denitrification bioreactor within a marine habitat. This organism is characterized by the presence of flagella, which suggests an ability to actively move in its environment, potentially facilitating its role in biogeochemical processes. Halomonas sp. has been observed to associate with specific hosts, including Salicornia rubra, Salicornia utahensis, and Allenrolfea occidentalis. These host plants are often found in saline environments, indicating that Halomonas sp. is likely adapted to thrive in high-salinity conditions, which is a common trait among members of the Halomonas genus. The genomic analysis of MAG TPA_asm reveals that it contains two replicons, which may reflect its genetic adaptability and potential for horizontal gene transfer. This feature could enhance its survival and functionality in its ecological niche, particularly in bioreactor systems designed for denitrification, where efficient nutrient cycling is crucial. In summary, Halomonas sp. exhibits traits that enable it to play a significant role in marine denitrification processes, potentially contributing to the reduction of nitrogen compounds in saline environments. Its interactions with halophytic plants further underscore its ecological importance in maintaining the balance of nutrient cycles in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyHalomonadaceae
GenusHalomonas
SpeciesHalomonas sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of MAG TPA_asm: Halomonas sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdenitritation bioreactor; Marine
Biotic relationshipNot Available
Host(s)Salicornia rubra, Salicornia utahensis, Allenrolfea occidentalis
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Halomonas sp. isolate UBA10374 contig_24160, whole

Gene Summary

Adenine Count

630045 bp

Thymine Count

631372 bp

Guanine Count

835926 bp

Cytosine Count

829286 bp

Genome Length

3113950 bp

Protein-coding Genes

3544 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminopeptidase nDD685_01025Not AvailablePositive166397 - 16777051592.3
aminopeptidase nDD685_01030Not AvailablePositive167872 - 16915047894.9
lipid kinaseDD685_01035Not AvailablePositive169191 - 16978220812.9
lipid kinaseDD685_01040Not AvailablePositive169903 - 17028614024.7
hypothetical proteinDD685_01045Not AvailablePositive170317 - 17103025984.6
cold-shock proteinDD685_01050Not AvailableNegative171259 - 1714406645.67
30s ribosomal protein s2DD685_01055Not AvailablePositive171572 - 17196414017.5
elongation factor tsDD685_01060Not AvailablePositive172179 - 17304830950.9
ump kinaseDD685_01065Not AvailablePositive173175 - 17394527679.7
ribosome recycling factorDD685_01070Not AvailablePositive173950 - 17450720644.6

Displaying genes 221 – 230 of 6918 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.