MAG TPA_asm: Alphaproteobacteria bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Family

Genus

Description

MAG TPA_asm is an Alphaproteobacteria bacterium characterized by having three replicons. This trait suggests a complex genetic organization, which may facilitate diverse metabolic capabilities and adaptability to various environments. The organism is categorized within the Alphaproteobacteria class, known for its ecological significance and roles in various biogeochemical processes. The genome of MAG TPA_asm is associated with three specific accessions: DOFU00000000.1, DOVD00000000.1, and DPBV00000000.1. These accessions indicate that the genomic data has been cataloged in biological databases, allowing for further analysis and comparisons with related microorganisms. Alphaproteobacteria are often found in diverse habitats, including soil, water, and as symbionts within plants and animals. They play crucial roles in nitrogen fixation, carbon cycling, and other ecological functions. The presence of MAG TPA_asm in specific environments could contribute to our understanding of microbial community dynamics and ecosystem health. In summary, the unique genomic structure and classification of MAG TPA_asm within Alphaproteobacteria highlight its potential ecological roles and adaptability. Understanding this bacterium's functions may provide insights into its contributions to nutrient cycling and its interactions within microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Alphaproteobacteria bacterium isolate UBA8654

Gene Summary

Adenine Count

404936 bp

Thymine Count

403189 bp

Guanine Count

539542 bp

Cytosine Count

547998 bp

Genome Length

1999114 bp

Protein-coding Genes

2054 genes

Non-Coding Genes

33 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxidoreductaseDEO58_09405Not AvailablePositive1821846 - 182320451007.1
phenylpropionate dioxygenaseDEO58_09410Not AvailablePositive1823212 - 182369418804.5
short-chain dehydrogenaseDEO58_09415Not AvailablePositive1823786 - 182451125638.9
c4-dicarboxylate abc transporter permeaseDEO58_09420Not AvailableNegative1824562 - 182585445449.0
trap transporter small permeaseDEO58_09425Not AvailableNegative1825858 - 182638219316.3
aromatic-ring-hydroxylating dioxygenase subunit betaDEO58_09430Not AvailableNegative1826530 - 182702719488.1
ribosomal subunit interface proteinDEO58_09435Not AvailableNegative1827024 - 182835550104.7
c4-dicarboxylate abc transporter substrate-binding proteinDEO58_09440Not AvailablePositive1828584 - 182959135894.1
alpha/beta hydrolaseDEO58_09445Not AvailablePositive1830092 - 183097331626.5
hypothetical proteinDEO58_09450Not AvailableNegative1831007 - 183146515814.8

Displaying genes 6281 – 6290 of 6792 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.