MAG TPA_asm: Alphaproteobacteria bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Family

Genus

Description

MAG TPA_asm is an Alphaproteobacteria bacterium characterized by having three replicons. This trait suggests a complex genetic organization, which may facilitate diverse metabolic capabilities and adaptability to various environments. The organism is categorized within the Alphaproteobacteria class, known for its ecological significance and roles in various biogeochemical processes. The genome of MAG TPA_asm is associated with three specific accessions: DOFU00000000.1, DOVD00000000.1, and DPBV00000000.1. These accessions indicate that the genomic data has been cataloged in biological databases, allowing for further analysis and comparisons with related microorganisms. Alphaproteobacteria are often found in diverse habitats, including soil, water, and as symbionts within plants and animals. They play crucial roles in nitrogen fixation, carbon cycling, and other ecological functions. The presence of MAG TPA_asm in specific environments could contribute to our understanding of microbial community dynamics and ecosystem health. In summary, the unique genomic structure and classification of MAG TPA_asm within Alphaproteobacteria highlight its potential ecological roles and adaptability. Understanding this bacterium's functions may provide insights into its contributions to nutrient cycling and its interactions within microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Alphaproteobacteria bacterium isolate UBA8654

Gene Summary

Adenine Count

404936 bp

Thymine Count

403189 bp

Guanine Count

539542 bp

Cytosine Count

547998 bp

Genome Length

1999114 bp

Protein-coding Genes

2054 genes

Non-Coding Genes

33 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitroreductase family proteinDEO58_06150Not AvailablePositive1201269 - 120196125407.6
lysr family transcriptional regulatorDEO58_06155Not AvailableNegative1201945 - 120305740813.8
protocatechuate 4,5-dioxygenase subunit alphaDEO58_06160Not AvailablePositive1202980 - 120338115543.3
protocatechuate 3,4-dioxygenaseDEO58_06165Not AvailablePositive1203374 - 120421331003.8
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylaseDEO58_06170Not AvailablePositive1204269 - 120499425165.2
hypothetical proteinDEO58_06175Not AvailableNegative1205083 - 12053439708.88
translation initiation factor if-2DEO58_06180Not AvailableNegative1205351 - 12055637578.87
hypothetical proteinDEO58_06185Not AvailableNegative1205611 - 120618320954.3
hypothetical proteinDEO58_06190Not AvailableNegative1206257 - 120664314601.9
hypothetical proteinDEO58_06195Not AvailablePositive1206558 - 120767339549.4

Displaying genes 5631 – 5640 of 6792 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.