MAG TPA_asm: Advenella kashmirensis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Advenella

Description

Advenella kashmirensis, represented by the assembly MAG TPA_asm, is classified as a Gram-negative bacterium. This classification indicates that A. kashmirensis possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic typical of Gram-negative bacteria. The genomic assembly contains a single replicon, suggesting that this organism has a simplified genetic structure compared to those with multiple replicons. This may influence its adaptability and evolutionary capabilities in various environments. The accession number for this strain is DOEK00000000.1, which serves as a unique identifier for its genomic data within biological databases. Biologically, Advenella kashmirensis is likely to play a role in its ecosystem, potentially contributing to nutrient cycling or bioremediation processes, although specific ecological roles remain to be elucidated. The traits identified here highlight the organism's structural characteristics and genomic organization, which are essential for understanding its biology and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAdvenella
SpeciesAdvenella kashmirensis
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Advenella kashmirensis isolate UBA10707 contig_612,

Gene Summary

Adenine Count

1065391 bp

Thymine Count

1048289 bp

Guanine Count

1271308 bp

Cytosine Count

1288140 bp

Genome Length

4673472 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter small permeaseDD666_19935Not AvailableNegative4173220 - 417372018908.9
c4-dicarboxylate abc transporter substrate-binding proteinDD666_19940Not AvailableNegative4173747 - 417472735342.8
holliday junction branch migration protein ruvaDD666_19945Not AvailableNegative4175151 - 417571719814.1
crossover junction endodeoxyribonuclease ruvcDD666_19950Not AvailableNegative4176126 - 417667719630.0
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolaseDD666_19955Not AvailableNegative4176736 - 417832556622.3
fis family transcriptional regulatorDD666_19960Not AvailableNegative4178336 - 41785728852.81
trna dihydrouridine synthase dusbDD666_19965Not AvailableNegative4178608 - 417962737344.8
monooxygenaseDD666_19970Not AvailableNegative4179671 - 418082841605.0
hypothetical proteinDD666_19975Not AvailablePositive4181016 - 418138413799.3
hypothetical proteinDD666_19980Not AvailablePositive4181439 - 418237435997.3

Displaying genes 3891 – 3900 of 4357 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.