MAG TPA_asm: Advenella kashmirensis

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Advenella

Description

Advenella kashmirensis, represented by the assembly MAG TPA_asm, is classified as a Gram-negative bacterium. This classification indicates that A. kashmirensis possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic typical of Gram-negative bacteria. The genomic assembly contains a single replicon, suggesting that this organism has a simplified genetic structure compared to those with multiple replicons. This may influence its adaptability and evolutionary capabilities in various environments. The accession number for this strain is DOEK00000000.1, which serves as a unique identifier for its genomic data within biological databases. Biologically, Advenella kashmirensis is likely to play a role in its ecosystem, potentially contributing to nutrient cycling or bioremediation processes, although specific ecological roles remain to be elucidated. The traits identified here highlight the organism's structural characteristics and genomic organization, which are essential for understanding its biology and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAdvenella
SpeciesAdvenella kashmirensis
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Advenella kashmirensis isolate UBA10707 contig_612,

Gene Summary

Adenine Count

1065391 bp

Thymine Count

1048289 bp

Guanine Count

1271308 bp

Cytosine Count

1288140 bp

Genome Length

4673472 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tssfDD666_09665Not AvailableNegative2002090 - 200401572270.5
type vi secretion system baseplate subunit tsseDD666_09670Not AvailableNegative2004015 - 200456921117.2
impe family proteinDD666_09675Not AvailableNegative2004633 - 200545430279.2
type vi secretion system tube protein hcpDD666_09680Not AvailableNegative2005568 - 200605317202.2
type vi secretion system contractile sheath large subunitDD666_09685Not AvailableNegative2006239 - 200773556300.2
type vi secretion system contractile sheath small subunitDD666_09690Not AvailableNegative2007749 - 200831520670.6
type vi secretion system protein tssaDD666_09695Not AvailableNegative2008375 - 200942438062.7
c4-dicarboxylate abc transporter permeaseDD666_09700Not AvailableNegative2009794 - 201109246171.6
trap transporter permease dctqDD666_09705Not AvailableNegative2011177 - 201168618722.2
c4-dicarboxylate abc transporter substrate-binding proteinDD666_09710Not AvailableNegative2011683 - 201265735721.4

Displaying genes 1891 – 1900 of 4357 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.