MAG TPA_asm: Culturomica sp.

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Odoribacteraceae

Genus

Culturomica

Description

Culturomica sp. MAG TPA_asm is characterized by a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic data for this organism is cataloged under the accession number DOED00000000.1, providing a reference point for further studies and analyses. The presence of a single replicon suggests that Culturomica sp. may exhibit specific advantages in niche environments, potentially enhancing its efficiency in resource utilization and replication. This trait can be particularly important in microbial ecology, as organisms with fewer replicons may be better suited to thrive in conditions where rapid adaptation and growth are advantageous. In summary, the genomic simplicity of Culturomica sp. with its single replicon could play a crucial role in its ecological interactions and adaptability, reflecting the intricate balance of microorganisms within their ecosystems. Further exploration of its metabolic capabilities and environmental interactions may yield insights into its ecological significance and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyOdoribacteraceae
GenusCulturomica
SpeciesCulturomica sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Culturomica sp. isolate UBA11491 contig_2808, whole

Gene Summary

Adenine Count

1077518 bp

Thymine Count

1112338 bp

Guanine Count

861148 bp

Cytosine Count

772100 bp

Genome Length

3829305 bp

Protein-coding Genes

2979 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor histidine kinaseDD657_06840Not AvailableNegative1672137 - 167317138835.9
dna-binding response regulatorDD657_06845Not AvailableNegative1673220 - 167394227281.1
tolc family proteinDD657_06850Not AvailablePositive1674075 - 167537349236.9
efflux transporter periplasmic adaptor subunitDD657_06855Not AvailablePositive1675370 - 167644638781.6
cusa/czca family heavy metal efflux rnd transporterDD657_06860Not AvailablePositive1676449 - 1679544114357.0
two pore domain potassium channel family proteinDD657_06870Not AvailableNegative1680147 - 168082125815.2
glutaminaseDD657_06875Not AvailableNegative1680871 - 168183334394.5
amino acid permeaseDD657_06880Not AvailableNegative1681852 - 168342356702.7
mfs transporterDD657_06885Not AvailableNegative1683540 - 168473343465.3
bifunctional metallophosphatase/5'-nucleotidaseDD657_06890Not AvailablePositive1684751 - 168630758298.3

Displaying genes 1351 – 1360 of 3025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.