MAG TPA_asm: Culturomica sp.

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Odoribacteraceae

Genus

Culturomica

Description

Culturomica sp. MAG TPA_asm is characterized by a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic data for this organism is cataloged under the accession number DOED00000000.1, providing a reference point for further studies and analyses. The presence of a single replicon suggests that Culturomica sp. may exhibit specific advantages in niche environments, potentially enhancing its efficiency in resource utilization and replication. This trait can be particularly important in microbial ecology, as organisms with fewer replicons may be better suited to thrive in conditions where rapid adaptation and growth are advantageous. In summary, the genomic simplicity of Culturomica sp. with its single replicon could play a crucial role in its ecological interactions and adaptability, reflecting the intricate balance of microorganisms within their ecosystems. Further exploration of its metabolic capabilities and environmental interactions may yield insights into its ecological significance and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyOdoribacteraceae
GenusCulturomica
SpeciesCulturomica sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Culturomica sp. isolate UBA11491 contig_2808, whole

Gene Summary

Adenine Count

1077518 bp

Thymine Count

1112338 bp

Guanine Count

861148 bp

Cytosine Count

772100 bp

Genome Length

3829305 bp

Protein-coding Genes

2979 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent dna ligase ligaDD657_06240Not AvailablePositive1504297 - 150680494309.9
clp protease clpcDD657_06245Not AvailablePositive1506910 - 150939393246.5
transcriptional regulatorDD657_06250Not AvailableNegative1509421 - 150989417828.0
hypothetical proteinDD657_06255Not AvailableNegative1509926 - 151054924665.4
phosphodiesteraseDD657_06260Not AvailablePositive1510830 - 151241359730.8
gliding motility lipoprotein glddDD657_06265Not AvailableNegative1512416 - 151302123097.4
hemolysinDD657_06270Not AvailableNegative1513023 - 151433349739.4
single-stranded dna-binding proteinDD657_06275Not AvailableNegative1514412 - 151484616180.0
integration host factor subunit betaDD657_06280Not AvailablePositive1515396 - 151568310515.0
ribonuclease e/gDD657_06285Not AvailablePositive1515864 - 151740858714.8

Displaying genes 1231 – 1240 of 3025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.