MAG TPA_asm: Pseudomonas sp.

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

MAG TPA_asm represents a strain of Pseudomonas sp., identified as a Gram-negative, rod-shaped bacterium with aerobic oxygen requirements. This organism is notable for its presence in diverse habitats, including dental plaque, fresh and marine waters, nasal discharge, phyllosphere, rhizosphere, as well as soils and the tongue surface of various hosts. The optimal growth temperature for this bacterium is 40°C. Pseudomonas sp. exhibits flagella, enabling motility, which may contribute to its ability to colonize various environments and hosts. The strain has been reported to associate with a wide range of hosts, including Homo sapiens, several plant species such as Ocimum basilicum and Trifolium pratense, and even some aquatic organisms like Anopheles sp. This broad host range suggests a versatile ecological role, likely involving interactions that could be beneficial or pathogenic. The strain possesses three replicons, which may facilitate genetic diversity and adaptability in fluctuating environmental conditions. The pathogenicity noted in animal hosts indicates potential implications for health, particularly in environments where this bacterium is prevalent. In summary, Pseudomonas sp. from MAG TPA_asm exemplifies a highly adaptable bacterium inhabiting varied ecological niches. Its presence across multiple environments and hosts highlights its potential role in microbial communities and interactions, which may influence both ecosystem dynamics and host health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp.
StrainMAG TPA_asm:

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of MAG TPA_asm: Pseudomonas sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature40
Temperature rangeNot Available
Habitatdental plaque; Fresh water; Marine; nasal discharge; phyllosphere; rhizosphere; rhizosphere of common reeds; soils; tongue surface
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Cicer arietinum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

MAG TPA_asm: Pseudomonas sp. isolate UBA8181 contig_529, whole

Gene Summary

Adenine Count

1020840 bp

Thymine Count

1018640 bp

Guanine Count

1501800 bp

Cytosine Count

1501231 bp

Genome Length

5413818 bp

Protein-coding Genes

5499 genes

Non-Coding Genes

22 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-2-hydroxyacid dehydrogenaseDIT33_21445Not AvailableNegative4759150 - 476008234092.0
hypothetical proteinDIT33_21450Not AvailableNegative4760184 - 476047711287.7
ribonuclease dDIT33_21455Not AvailableNegative4760474 - 476160742780.4
class c beta-lactamaseDIT33_21460Not AvailablePositive4761905 - 476306241920.0
class i sam-dependent methyltransferaseDIT33_21465Not AvailableNegative4763059 - 476370323935.9
1,2-phenylacetyl-coa epoxidase subunit aDIT33_21470Not AvailablePositive4764138 - 476512737774.0
1,2-phenylacetyl-coa epoxidase subunit bDIT33_21475Not AvailablePositive4765143 - 476542410544.4
phenylacetate-coa oxygenase subunit paaiDIT33_21480Not AvailablePositive4765433 - 476619428534.8
phenylacetate-coa oxygenase subunit paajDIT33_21485Not AvailablePositive4766181 - 476671419189.9
phenylacetate-coa oxygenase/reductase subunit paakDIT33_21490Not AvailablePositive4766748 - 476782439640.1

Displaying genes 14371 – 14380 of 15100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.