MAG TPA_asm: Gammaproteobacteria bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

MAG TPA_asm is a bacterium classified within the phylum Gammaproteobacteria. It is characterized by having a single replicon, indicating a streamlined genomic structure. The accession number associated with this bacterium is DNYN00000000.1, which serves as a reference point for its genomic data within biological databases. The classification within the Gammaproteobacteria suggests that MAG TPA_asm shares common traits with other members of this diverse and ecologically significant class of bacteria. Gammaproteobacteria are known for their versatility and include a wide range of organisms, from those that are pathogenic to humans and animals to those that play critical roles in various ecosystems, including biogeochemical cycling. Given that MAG TPA_asm has only one replicon, it may exhibit characteristics such as efficient replication and adaptability, which can be advantageous in fluctuating environments. This trait might allow it to thrive in specific ecological niches, possibly contributing to nutrient cycling or other ecological processes within its habitat. In summary, MAG TPA_asm represents a member of the Gammaproteobacteria with a simple genomic structure that may facilitate its ecological roles. Understanding the traits of such microorganisms can provide insights into their potential functions and contributions to the environment, particularly in nutrient cycling and ecosystem dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Gammaproteobacteria bacterium isolate UBA8245

Gene Summary

Adenine Count

746661 bp

Thymine Count

750941 bp

Guanine Count

863467 bp

Cytosine Count

847801 bp

Genome Length

3315379 bp

Protein-coding Genes

3288 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid dehydrogenaseDDZ73_09250Not AvailableNegative1768203 - 176945345764.2
hydroxyproline-2-epimeraseDDZ73_09255Not AvailableNegative1769450 - 177039133811.1
shikimate dehydrogenaseDDZ73_09260Not AvailablePositive1770549 - 177139430323.4
ferrochelataseDDZ73_09265Not AvailableNegative1771479 - 177249538198.8
hypothetical proteinDDZ73_09270Not AvailablePositive1772842 - 177333618063.6
3-deoxy-d-manno-octulosonic acid transferaseDDZ73_09275Not AvailableNegative1774110 - 177538747315.4
oxygen-dependent coproporphyrinogen oxidaseDDZ73_09280Not AvailableNegative1775412 - 177633535420.4
trna threonylcarbamoyladenosine biosynthesis protein rimnDDZ73_09285Not AvailableNegative1776365 - 177692820814.2
5-(carboxyamino)imidazole ribonucleotide mutaseDDZ73_09290Not AvailableNegative1776906 - 177743618592.4
phosphoribosylamine--glycine ligaseDDZ73_09295Not AvailableNegative1777448 - 177874646475.3

Displaying genes 1791 – 1800 of 3324 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.