MAG TPA_asm: Gammaproteobacteria bacterium

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

MAG TPA_asm is a bacterium classified within the phylum Gammaproteobacteria. It is characterized by having a single replicon, indicating a streamlined genomic structure. The accession number associated with this bacterium is DNYN00000000.1, which serves as a reference point for its genomic data within biological databases. The classification within the Gammaproteobacteria suggests that MAG TPA_asm shares common traits with other members of this diverse and ecologically significant class of bacteria. Gammaproteobacteria are known for their versatility and include a wide range of organisms, from those that are pathogenic to humans and animals to those that play critical roles in various ecosystems, including biogeochemical cycling. Given that MAG TPA_asm has only one replicon, it may exhibit characteristics such as efficient replication and adaptability, which can be advantageous in fluctuating environments. This trait might allow it to thrive in specific ecological niches, possibly contributing to nutrient cycling or other ecological processes within its habitat. In summary, MAG TPA_asm represents a member of the Gammaproteobacteria with a simple genomic structure that may facilitate its ecological roles. Understanding the traits of such microorganisms can provide insights into their potential functions and contributions to the environment, particularly in nutrient cycling and ecosystem dynamics.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Gammaproteobacteria bacterium isolate UBA8245

Gene Summary

Adenine Count

746661 bp

Thymine Count

750941 bp

Guanine Count

863467 bp

Cytosine Count

847801 bp

Genome Length

3315379 bp

Protein-coding Genes

3288 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine abc transporter substrate-binding proteinDDZ73_06960Not AvailablePositive1338149 - 133882924234.2
polyamine abc transporter atp-binding proteinDDZ73_06965Not AvailablePositive1339270 - 134035839974.3
abc transporter permeaseDDZ73_06970Not AvailablePositive1340451 - 134128030663.7
voc family proteinDDZ73_06980Not AvailablePositive1342092 - 13423218139.47
hypothetical proteinDDZ73_06985Not AvailablePositive1342406 - 134274912957.7
argininosuccinate lyaseDDZ73_06990Not AvailablePositive1342857 - 134393939920.6
hypothetical proteinDDZ73_06995Not AvailablePositive1344044 - 134434911388.0
duf479 domain-containing proteinDDZ73_07000Not AvailableNegative1344367 - 134496323299.6
hypothetical proteinDDZ73_07005Not AvailableNegative1344960 - 134565225265.2
hypothetical proteinDDZ73_07010Not AvailablePositive1345773 - 134657329674.1

Displaying genes 1351 – 1360 of 3324 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.