MAG TPA_asm: Cytophagales bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Genus

Description

MAG TPA_asm is a Cytophagales bacterium characterized by a single replicon, which suggests a streamlined genomic organization. This trait may be indicative of its adaptive strategies in various environments. The genomic information for MAG TPA_asm is available under the accession DNTA00000000.1. Cytophagales is a group of bacteria known for their role in the degradation of organic matter, particularly in aquatic environments. This ecological function is crucial as it contributes to nutrient cycling and the overall health of ecosystems. The single replicon structure may enhance the efficiency of genomic replication and expression, potentially allowing for a faster response to environmental changes. In summary, the genomic simplicity of MAG TPA_asm, as evidenced by its single replicon, may play a significant role in its ecological function within its habitat, particularly in organic matter degradation. Further exploration of its genomic features could provide insights into its specific roles and interactions in microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Cytophagales bacterium isolate UBA10427 contig_3592,

Gene Summary

Adenine Count

1268756 bp

Thymine Count

1268745 bp

Guanine Count

884073 bp

Cytosine Count

882069 bp

Genome Length

4303780 bp

Protein-coding Genes

3994 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysine--trna ligaseDDY13_04700Not AvailableNegative1001715 - 100344866687.3
proline dehydrogenaseDDY13_04705Not AvailableNegative1003595 - 100477945172.1
3-deoxy-7-phosphoheptulonate synthaseDDY13_04710Not AvailablePositive1004846 - 100593741796.1
3-dehydroquinate synthaseDDY13_04715Not AvailablePositive1005942 - 100699139311.5
3-phosphoshikimate 1-carboxyvinyltransferaseDDY13_04720Not AvailablePositive1007299 - 100852845256.8
peptidase m42DDY13_04725Not AvailableNegative1008566 - 100963939818.5
homoserine transporterDDY13_04730Not AvailableNegative1009720 - 101036123277.3
gh3 auxin-responsive promoterDDY13_04735Not AvailableNegative1010358 - 101192060002.1
yggs family pyridoxal phosphate-dependent enzymeDDY13_04740Not AvailablePositive1012010 - 101268425491.9
duf423 domain-containing proteinDDY13_04745Not AvailablePositive1012687 - 101306413424.8

Displaying genes 931 – 940 of 4032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.