MAG TPA_asm: Cytophagales bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Genus

Description

MAG TPA_asm is a Cytophagales bacterium characterized by a single replicon, which suggests a streamlined genomic organization. This trait may be indicative of its adaptive strategies in various environments. The genomic information for MAG TPA_asm is available under the accession DNTA00000000.1. Cytophagales is a group of bacteria known for their role in the degradation of organic matter, particularly in aquatic environments. This ecological function is crucial as it contributes to nutrient cycling and the overall health of ecosystems. The single replicon structure may enhance the efficiency of genomic replication and expression, potentially allowing for a faster response to environmental changes. In summary, the genomic simplicity of MAG TPA_asm, as evidenced by its single replicon, may play a significant role in its ecological function within its habitat, particularly in organic matter degradation. Further exploration of its genomic features could provide insights into its specific roles and interactions in microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Cytophagales bacterium isolate UBA10427 contig_3592,

Gene Summary

Adenine Count

1268756 bp

Thymine Count

1268745 bp

Guanine Count

884073 bp

Cytosine Count

882069 bp

Genome Length

4303780 bp

Protein-coding Genes

3994 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux transporter periplasmic adaptor subunitDDY13_20305Not AvailablePositive4273879 - 427527051057.1
glycosyltransferase family 1 proteinDDY13_20310Not AvailablePositive4275338 - 427647743971.4
septal ring lytic transglycosylase rlpa family lipoproteinDDY13_20315Not AvailablePositive4276520 - 427681310818.1
hypothetical proteinDDY13_20320Not AvailableNegative4277003 - 427774929603.9
hypothetical proteinDDY13_20325Not AvailableNegative4278151 - 427853115047.6
hypothetical proteinDDY13_20330Not AvailablePositive4278581 - 427915422606.1
hypothetical proteinDDY13_20335Not AvailablePositive4279479 - 428021927988.7
hypothetical proteinDDY13_20340Not AvailablePositive4280272 - 428057110178.4
hindvp family restriction endonucleaseDDY13_20350Not AvailablePositive4282273 - 428333440640.2
hypothetical proteinDDY13_20355Not AvailablePositive4283491 - 428409923948.0

Displaying genes 4001 – 4010 of 4032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.