MAG TPA_asm: Cytophagales bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Genus

Description

MAG TPA_asm is a Cytophagales bacterium characterized by a single replicon, which suggests a streamlined genomic organization. This trait may be indicative of its adaptive strategies in various environments. The genomic information for MAG TPA_asm is available under the accession DNTA00000000.1. Cytophagales is a group of bacteria known for their role in the degradation of organic matter, particularly in aquatic environments. This ecological function is crucial as it contributes to nutrient cycling and the overall health of ecosystems. The single replicon structure may enhance the efficiency of genomic replication and expression, potentially allowing for a faster response to environmental changes. In summary, the genomic simplicity of MAG TPA_asm, as evidenced by its single replicon, may play a significant role in its ecological function within its habitat, particularly in organic matter degradation. Further exploration of its genomic features could provide insights into its specific roles and interactions in microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Cytophagales bacterium isolate UBA10427 contig_3592,

Gene Summary

Adenine Count

1268756 bp

Thymine Count

1268745 bp

Guanine Count

884073 bp

Cytosine Count

882069 bp

Genome Length

4303780 bp

Protein-coding Genes

3994 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna pseudouridine synthaseDDY13_20105Not AvailablePositive4229664 - 423037727342.0
50s ribosomal protein l13DDY13_20110Not AvailablePositive4230722 - 423116516606.1
30s ribosomal protein s9DDY13_20115Not AvailablePositive4231171 - 423155714570.6
30s ribosomal protein s2DDY13_20120Not AvailablePositive4231584 - 423236929570.1
elongation factor tsDDY13_20125Not AvailablePositive4232471 - 423330129848.7
hypothetical proteinDDY13_20130Not AvailableNegative4233362 - 42335748183.19
hypothetical proteinDDY13_20135Not AvailableNegative4233642 - 423398013110.1
hypothetical proteinDDY13_20140Not AvailablePositive4234352 - 423618470066.1
mfs transporterDDY13_20145Not AvailablePositive4236303 - 423722634073.9
Tmrna,resume consensus sequence (at 87): cataattggcgaaaataaNot AvailableNot AvailablePositive4237464 - 4237878Not Available

Displaying genes 3961 – 3970 of 4032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.