MAG TPA_asm: Cytophagales bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Genus

Description

MAG TPA_asm is a Cytophagales bacterium characterized by a single replicon, which suggests a streamlined genomic organization. This trait may be indicative of its adaptive strategies in various environments. The genomic information for MAG TPA_asm is available under the accession DNTA00000000.1. Cytophagales is a group of bacteria known for their role in the degradation of organic matter, particularly in aquatic environments. This ecological function is crucial as it contributes to nutrient cycling and the overall health of ecosystems. The single replicon structure may enhance the efficiency of genomic replication and expression, potentially allowing for a faster response to environmental changes. In summary, the genomic simplicity of MAG TPA_asm, as evidenced by its single replicon, may play a significant role in its ecological function within its habitat, particularly in organic matter degradation. Further exploration of its genomic features could provide insights into its specific roles and interactions in microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Cytophagales bacterium isolate UBA10427 contig_3592,

Gene Summary

Adenine Count

1268756 bp

Thymine Count

1268745 bp

Guanine Count

884073 bp

Cytosine Count

882069 bp

Genome Length

4303780 bp

Protein-coding Genes

3994 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps export abc transporter periplasmic protein lptcDDY13_18070Not AvailableNegative3777089 - 377762520563.3
hypothetical proteinDDY13_18075Not AvailablePositive3777649 - 377966977670.2
restriction endonucleaseDDY13_18080Not AvailablePositive3779674 - 378091548319.3
hypothetical proteinDDY13_18085Not AvailablePositive3780917 - 37811659361.32
imidazole glycerol phosphate synthase subunit hishDDY13_18090Not AvailablePositive3781488 - 378206921510.9
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseDDY13_18095Not AvailablePositive3782081 - 378280026165.2
imidazole glycerol phosphate synthase subunit hisfDDY13_18100Not AvailablePositive3782800 - 378356126979.3
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphataseDDY13_18105Not AvailablePositive3783571 - 378416422422.6
amidinotransferaseDDY13_18110Not AvailablePositive3784216 - 378510933508.9
hypothetical proteinDDY13_18115Not AvailablePositive3785218 - 378585024974.4

Displaying genes 3561 – 3570 of 4032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.