MAG TPA_asm: Cytophagales bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Genus

Description

MAG TPA_asm is a Cytophagales bacterium characterized by a single replicon, which suggests a streamlined genomic organization. This trait may be indicative of its adaptive strategies in various environments. The genomic information for MAG TPA_asm is available under the accession DNTA00000000.1. Cytophagales is a group of bacteria known for their role in the degradation of organic matter, particularly in aquatic environments. This ecological function is crucial as it contributes to nutrient cycling and the overall health of ecosystems. The single replicon structure may enhance the efficiency of genomic replication and expression, potentially allowing for a faster response to environmental changes. In summary, the genomic simplicity of MAG TPA_asm, as evidenced by its single replicon, may play a significant role in its ecological function within its habitat, particularly in organic matter degradation. Further exploration of its genomic features could provide insights into its specific roles and interactions in microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Cytophagales bacterium isolate UBA10427 contig_3592,

Gene Summary

Adenine Count

1268756 bp

Thymine Count

1268745 bp

Guanine Count

884073 bp

Cytosine Count

882069 bp

Genome Length

4303780 bp

Protein-coding Genes

3994 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-directed rna polymerase subunit betaDDY13_16845Not AvailableNegative3535039 - 3538911145309.0
50s ribosomal protein l7/l12DDY13_16850Not AvailableNegative3539054 - 353943412933.4
50s ribosomal protein l10DDY13_16855Not AvailableNegative3539475 - 354000819636.6
50s ribosomal protein l1DDY13_16860Not AvailableNegative3540011 - 354070925228.8
50s ribosomal protein l11DDY13_16865Not AvailableNegative3540721 - 354116415884.4
transcription termination/antitermination factor nusgDDY13_16870Not AvailableNegative3541169 - 354172620999.3
preprotein translocase subunit seceDDY13_16875Not AvailableNegative3541748 - 35419367468.21
Trna-trpNot AvailableNot AvailablePositive3541956 - 3542031Not Available
elongation factor tuDDY13_16885Not AvailableNegative3542132 - 354331943385.2
Trna-thrNot AvailableNot AvailablePositive3543375 - 3543449Not Available

Displaying genes 3321 – 3330 of 4032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.