MAG TPA_asm: Cytophagales bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Genus

Description

MAG TPA_asm is a Cytophagales bacterium characterized by a single replicon, which suggests a streamlined genomic organization. This trait may be indicative of its adaptive strategies in various environments. The genomic information for MAG TPA_asm is available under the accession DNTA00000000.1. Cytophagales is a group of bacteria known for their role in the degradation of organic matter, particularly in aquatic environments. This ecological function is crucial as it contributes to nutrient cycling and the overall health of ecosystems. The single replicon structure may enhance the efficiency of genomic replication and expression, potentially allowing for a faster response to environmental changes. In summary, the genomic simplicity of MAG TPA_asm, as evidenced by its single replicon, may play a significant role in its ecological function within its habitat, particularly in organic matter degradation. Further exploration of its genomic features could provide insights into its specific roles and interactions in microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Cytophagales bacterium isolate UBA10427 contig_3592,

Gene Summary

Adenine Count

1268756 bp

Thymine Count

1268745 bp

Guanine Count

884073 bp

Cytosine Count

882069 bp

Genome Length

4303780 bp

Protein-coding Genes

3994 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDDY13_07990Not AvailablePositive1668678 - 166917819543.7
m13 family peptidaseDDY13_07995Not AvailableNegative1669235 - 167129278042.7
dihydrolipoyl dehydrogenaseDDY13_08000Not AvailableNegative1671467 - 167286750675.5
dihydrolipoamide succinyltransferaseDDY13_08005Not AvailableNegative1672887 - 167447358062.6
2-oxoglutarate dehydrogenase e1 componentDDY13_08010Not AvailableNegative1674486 - 1677206103702.0
30s ribosomal protein s16DDY13_08015Not AvailablePositive1677450 - 167821128328.5
16s rrna processing protein rimmDDY13_08020Not AvailablePositive1678222 - 167874319551.5
trna (guanosine(37)-n1)-methyltransferase trmdDDY13_08025Not AvailablePositive1678743 - 167943225809.2
50s ribosomal protein l19DDY13_08030Not AvailablePositive1679510 - 167986613609.7
diaminopimelate epimeraseDDY13_08035Not AvailablePositive1679944 - 168073829278.5

Displaying genes 1581 – 1590 of 4032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.