MAG TPA_asm: Cytophagales bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Genus

Description

MAG TPA_asm is a Cytophagales bacterium characterized by a single replicon, which suggests a streamlined genomic organization. This trait may be indicative of its adaptive strategies in various environments. The genomic information for MAG TPA_asm is available under the accession DNTA00000000.1. Cytophagales is a group of bacteria known for their role in the degradation of organic matter, particularly in aquatic environments. This ecological function is crucial as it contributes to nutrient cycling and the overall health of ecosystems. The single replicon structure may enhance the efficiency of genomic replication and expression, potentially allowing for a faster response to environmental changes. In summary, the genomic simplicity of MAG TPA_asm, as evidenced by its single replicon, may play a significant role in its ecological function within its habitat, particularly in organic matter degradation. Further exploration of its genomic features could provide insights into its specific roles and interactions in microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Cytophagales bacterium isolate UBA10427 contig_3592,

Gene Summary

Adenine Count

1268756 bp

Thymine Count

1268745 bp

Guanine Count

884073 bp

Cytosine Count

882069 bp

Genome Length

4303780 bp

Protein-coding Genes

3994 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine synthaseDDY13_06070Not AvailableNegative1285843 - 128651725905.2
hypothetical proteinDDY13_06075Not AvailableNegative1286535 - 128841571301.3
hypothetical proteinDDY13_06080Not AvailableNegative1288597 - 128944833656.5
hypothetical proteinDDY13_06085Not AvailableNegative1289691 - 129008614960.0
hypothetical proteinDDY13_06090Not AvailableNegative1290162 - 129051513622.4
hypothetical proteinDDY13_06095Not AvailableNegative1290461 - 129079913304.2
hypothetical proteinDDY13_06100Not AvailablePositive1290800 - 129106910167.5
hypothetical proteinDDY13_06105Not AvailablePositive1291164 - 129161016830.8
short-chain dehydrogenaseDDY13_06110Not AvailablePositive1291656 - 129249830752.9
efflux rnd transporter periplasmic adaptor subunitDDY13_06115Not AvailablePositive1292614 - 129376243152.1

Displaying genes 1201 – 1210 of 4032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.