MAG TPA_asm: Cytophagales bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Genus

Description

MAG TPA_asm is a Cytophagales bacterium characterized by a single replicon, which suggests a streamlined genomic organization. This trait may be indicative of its adaptive strategies in various environments. The genomic information for MAG TPA_asm is available under the accession DNTA00000000.1. Cytophagales is a group of bacteria known for their role in the degradation of organic matter, particularly in aquatic environments. This ecological function is crucial as it contributes to nutrient cycling and the overall health of ecosystems. The single replicon structure may enhance the efficiency of genomic replication and expression, potentially allowing for a faster response to environmental changes. In summary, the genomic simplicity of MAG TPA_asm, as evidenced by its single replicon, may play a significant role in its ecological function within its habitat, particularly in organic matter degradation. Further exploration of its genomic features could provide insights into its specific roles and interactions in microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Cytophagales bacterium isolate UBA10427 contig_3592,

Gene Summary

Adenine Count

1268756 bp

Thymine Count

1268745 bp

Guanine Count

884073 bp

Cytosine Count

882069 bp

Genome Length

4303780 bp

Protein-coding Genes

3994 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDDY13_05665Not AvailablePositive1210727 - 121110715048.4
hypothetical proteinDDY13_05670Not AvailablePositive1211223 - 121157612922.4
toxin-antitoxin system ywqk family antitoxinDDY13_05675Not AvailablePositive1211731 - 121220718147.3
hypothetical proteinDDY13_05680Not AvailableNegative1212312 - 121269814696.9
hypothetical proteinDDY13_05685Not AvailablePositive1212827 - 121313212336.6
tigr01777 family proteinDDY13_05690Not AvailablePositive1213215 - 121412333507.4
tigr00730 family rossman fold proteinDDY13_05695Not AvailablePositive1214147 - 121491128774.5
murein transglycosylaseDDY13_05700Not AvailablePositive1214911 - 121582235835.9
excinuclease abc subunit uvraDDY13_05705Not AvailablePositive1215921 - 1218755106209.0
duf4442 domain-containing proteinDDY13_05710Not AvailableNegative1218758 - 121926419408.9

Displaying genes 1121 – 1130 of 4032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.