MAG TPA_asm: Clostridiales bacterium

Non-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Genus

Description

MAG TPA_asm: Clostridiales bacterium is a chemoheterotrophic microorganism predominantly found in the caeca and crops of its host, Gallus gallus (domestic chicken). This bacterium is adapted to an anaerobic environment, which is characteristic of the gut microbiota in avian species. The taxonomic classification of this organism is still uncharacterized at the Gram-staining level, suggesting that further research is needed to clarify its cellular properties. Notably, the bacterium possesses flagella, indicating a potential for motility, although it is stated that the organism is not mobile. This discrepancy may warrant additional investigation into the functional role of the flagella in its life cycle or ecological niche. MAG TPA_asm has a relatively complex genomic structure, with three replicons identified in its genetic makeup. This may reflect a diverse metabolic capability, which is often linked to the adaptability of bacteria in fluctuating environments, such as the gut of chickens. The presence of this bacterium in the gastrointestinal tract of Gallus gallus highlights its potential role in the digestive processes or overall health of the host. Understanding the specific contributions of MAG TPA_asm to the gut microbiome could provide insights into avian health, digestion, and nutrient absorption. Further research is necessary to elucidate its interactions with other gut microbes and its impact on the host's physiology.

Profile

Physiology
Gram staining propertiesUncharacterized
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcaeca; crops
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Clostridiales bacterium


Gene Summary

Adenine Count

762927 bp

Thymine Count

781577 bp

Guanine Count

473044 bp

Cytosine Count

486507 bp

Genome Length

2512164 bp

Protein-coding Genes

2389 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoate--protein ligaseDDX29_03565Not AvailablePositive698963 - 69994937793.2
upf0182 family proteinDDX29_03570Not AvailableNegative700136 - 702901105347.0
b/f/g family rna polymerase sigma-70 factorDDX29_03575Not AvailableNegative703033 - 70379129795.7
hypothetical proteinDDX29_03580Not AvailableNegative703794 - 70416514282.3
anti-sigma factor antagonistDDX29_03585Not AvailableNegative704174 - 70447911633.3
dna gyrase subunit aDDX29_03590Not AvailableNegative704492 - 70693092038.0
dna topoisomerase (atp-hydrolyzing) subunit bDDX29_03595Not AvailableNegative706945 - 70886472072.0
dna replication/repair protein recfDDX29_03600Not AvailableNegative708874 - 70999543547.8
s4 domain-containing protein yaaaDDX29_03605Not AvailableNegative710005 - 7102117746.66
dna polymerase iii subunit betaDDX29_03610Not AvailableNegative710226 - 71132641047.4

Displaying genes 701 – 710 of 6852 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.