MAG TPA_asm: Clostridiales bacterium

Non-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Genus

Description

MAG TPA_asm: Clostridiales bacterium is a chemoheterotrophic microorganism predominantly found in the caeca and crops of its host, Gallus gallus (domestic chicken). This bacterium is adapted to an anaerobic environment, which is characteristic of the gut microbiota in avian species. The taxonomic classification of this organism is still uncharacterized at the Gram-staining level, suggesting that further research is needed to clarify its cellular properties. Notably, the bacterium possesses flagella, indicating a potential for motility, although it is stated that the organism is not mobile. This discrepancy may warrant additional investigation into the functional role of the flagella in its life cycle or ecological niche. MAG TPA_asm has a relatively complex genomic structure, with three replicons identified in its genetic makeup. This may reflect a diverse metabolic capability, which is often linked to the adaptability of bacteria in fluctuating environments, such as the gut of chickens. The presence of this bacterium in the gastrointestinal tract of Gallus gallus highlights its potential role in the digestive processes or overall health of the host. Understanding the specific contributions of MAG TPA_asm to the gut microbiome could provide insights into avian health, digestion, and nutrient absorption. Further research is necessary to elucidate its interactions with other gut microbes and its impact on the host's physiology.

Profile

Physiology
Gram staining propertiesUncharacterized
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcaeca; crops
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Clostridiales bacterium isolate UBA7928 contig_7554,

Gene Summary

Adenine Count

762927 bp

Thymine Count

781577 bp

Guanine Count

473044 bp

Cytosine Count

486507 bp

Genome Length

2512164 bp

Protein-coding Genes

2389 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseDDX29_11290Not AvailableNegative2291031 - 229235650302.4
peptide abc transporter permeaseDDX29_11295Not AvailableNegative2292367 - 229340438651.3
peptide abc transporter substrate-binding proteinDDX29_11300Not AvailableNegative2293528 - 229538170260.9
hypothetical proteinDDX29_11305Not AvailableNegative2295609 - 229631928229.2
hypothetical proteinDDX29_11310Not AvailableNegative2296692 - 229828761173.7
hypothetical proteinDDX29_11315Not AvailablePositive2298555 - 229931930159.3
hypothetical proteinDDX29_11320Not AvailablePositive2299516 - 2304666189621.0
udp-glucose 4-epimeraseDDX29_11325Not AvailablePositive2304667 - 230503813884.6
had family hydrolaseDDX29_11330Not AvailablePositive2305113 - 230567921136.9
hypothetical proteinDDX29_11335Not AvailablePositive2305698 - 230665135490.6

Displaying genes 2221 – 2230 of 6852 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.