MAG TPA_asm: Clostridiales bacterium

Non-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Genus

Description

MAG TPA_asm: Clostridiales bacterium is a chemoheterotrophic microorganism predominantly found in the caeca and crops of its host, Gallus gallus (domestic chicken). This bacterium is adapted to an anaerobic environment, which is characteristic of the gut microbiota in avian species. The taxonomic classification of this organism is still uncharacterized at the Gram-staining level, suggesting that further research is needed to clarify its cellular properties. Notably, the bacterium possesses flagella, indicating a potential for motility, although it is stated that the organism is not mobile. This discrepancy may warrant additional investigation into the functional role of the flagella in its life cycle or ecological niche. MAG TPA_asm has a relatively complex genomic structure, with three replicons identified in its genetic makeup. This may reflect a diverse metabolic capability, which is often linked to the adaptability of bacteria in fluctuating environments, such as the gut of chickens. The presence of this bacterium in the gastrointestinal tract of Gallus gallus highlights its potential role in the digestive processes or overall health of the host. Understanding the specific contributions of MAG TPA_asm to the gut microbiome could provide insights into avian health, digestion, and nutrient absorption. Further research is necessary to elucidate its interactions with other gut microbes and its impact on the host's physiology.

Profile

Physiology
Gram staining propertiesUncharacterized
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcaeca; crops
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Clostridiales bacterium isolate UBA7928 contig_7554,

Gene Summary

Adenine Count

762927 bp

Thymine Count

781577 bp

Guanine Count

473044 bp

Cytosine Count

486507 bp

Genome Length

2512164 bp

Protein-coding Genes

2389 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain amino acid abc transporter atp-binding proteinDDX29_10375Not AvailableNegative2107432 - 210814226333.6
abc transporter atp-binding proteinDDX29_10380Not AvailableNegative2108129 - 210888727916.2
branched-chain amino acid abc transporter permeaseDDX29_10385Not AvailableNegative2108880 - 210977932522.9
branched-chain amino acid abc transporter permeaseDDX29_10390Not AvailableNegative2109795 - 211066730997.6
receptorDDX29_10395Not AvailableNegative2110719 - 211185541140.7
urocanate hydrataseDDX29_10400Not AvailableNegative2112058 - 211377363558.2
sigma-54-dependent fis family transcriptional regulatorDDX29_10405Not AvailablePositive2114043 - 211569563833.4
glutamate formimidoyltransferaseDDX29_10410Not AvailableNegative2115706 - 211658132437.1
formiminotransferase-cyclodeaminaseDDX29_10415Not AvailableNegative2116578 - 211715320394.6
marr family transcriptional regulatorDDX29_10420Not AvailablePositive2117635 - 211808117446.1

Displaying genes 2041 – 2050 of 6852 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.