MAG TPA_asm: Clostridiales bacterium

Non-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Genus

Description

MAG TPA_asm: Clostridiales bacterium is a chemoheterotrophic microorganism predominantly found in the caeca and crops of its host, Gallus gallus (domestic chicken). This bacterium is adapted to an anaerobic environment, which is characteristic of the gut microbiota in avian species. The taxonomic classification of this organism is still uncharacterized at the Gram-staining level, suggesting that further research is needed to clarify its cellular properties. Notably, the bacterium possesses flagella, indicating a potential for motility, although it is stated that the organism is not mobile. This discrepancy may warrant additional investigation into the functional role of the flagella in its life cycle or ecological niche. MAG TPA_asm has a relatively complex genomic structure, with three replicons identified in its genetic makeup. This may reflect a diverse metabolic capability, which is often linked to the adaptability of bacteria in fluctuating environments, such as the gut of chickens. The presence of this bacterium in the gastrointestinal tract of Gallus gallus highlights its potential role in the digestive processes or overall health of the host. Understanding the specific contributions of MAG TPA_asm to the gut microbiome could provide insights into avian health, digestion, and nutrient absorption. Further research is necessary to elucidate its interactions with other gut microbes and its impact on the host's physiology.

Profile

Physiology
Gram staining propertiesUncharacterized
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcaeca; crops
Biotic relationshipNot Available
Host(s)Gallus gallus
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Clostridiales bacterium


Gene Summary

Adenine Count

762927 bp

Thymine Count

781577 bp

Guanine Count

473044 bp

Cytosine Count

486507 bp

Genome Length

2512164 bp

Protein-coding Genes

2389 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbamate kinaseDDX29_05660Not AvailableNegative1115610 - 111645730557.8
ornithine carbamoyltransferaseDDX29_05665Not AvailableNegative1116490 - 111747937093.8
arginine deiminaseDDX29_05670Not AvailableNegative1117555 - 111876646805.1
hypothetical proteinDDX29_05675Not AvailableNegative1118858 - 111963429410.3
hypothetical proteinDDX29_05680Not AvailablePositive1119788 - 112062131514.3
transposaseDDX29_05685Not AvailableNegative1120625 - 112136229378.4
nrdh-redoxinDDX29_05690Not AvailablePositive1121535 - 11217628303.97
hypothetical proteinDDX29_05695Not AvailableNegative1121827 - 112258227312.0
d-lysine 5,6-aminomutase subunit alphaDDX29_05700Not AvailableNegative1122582 - 112413857432.3
dna mismatch repair protein mutsDDX29_05705Not AvailableNegative1124144 - 112575761012.3

Displaying genes 1111 – 1120 of 6852 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.