Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor antagonist | DEP83_04665 | Not Available | Positive | 1144477 - 1144809 | 12294.8 |
| rna polymerase subunit sigma-70 | DEP83_04670 | Not Available | Positive | 1144928 - 1145464 | 20601.0 |
| hypothetical protein | DEP83_04675 | Not Available | Positive | 1145479 - 1145928 | 17543.1 |
| hypothetical protein | DEP83_04680 | Not Available | Positive | 1145946 - 1146386 | 16810.6 |
| hypothetical protein | DEP83_04685 | Not Available | Positive | 1146437 - 1147342 | 34073.3 |
| diguanylate cyclase | DEP83_04690 | Not Available | Positive | 1147493 - 1149154 | 63095.0 |
| putative toxin-antitoxin system toxin component, pin family | DEP83_04695 | Not Available | Negative | 1149182 - 1149664 | 18558.8 |
| urocanate hydratase | DEP83_04700 | Not Available | Positive | 1150047 - 1152032 | 74590.8 |
| glutamate formimidoyltransferase | DEP83_04705 | Not Available | Positive | 1152117 - 1153013 | 32872.8 |
| nicotinamide mononucleotide transporter | DEP83_04710 | Not Available | Positive | 1153019 - 1153600 | 22186.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
