Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DEP83_04610 | Not Available | Negative | 1128585 - 1130069 | 56692.4 |
| susc/raga family tonb-linked outer membrane protein | DEP83_04615 | Not Available | Negative | 1130088 - 1133432 | 122329.0 |
| hypothetical protein | DEP83_04620 | Not Available | Negative | 1133619 - 1134596 | 36958.5 |
| rna polymerase sigma-70 factor | DEP83_04625 | Not Available | Negative | 1134699 - 1135211 | 20382.4 |
| is256 family transposase | DEP83_04630 | Not Available | Negative | 1135626 - 1136843 | 46873.0 |
| gfo/idh/moca family oxidoreductase | DEP83_04640 | Not Available | Positive | 1138011 - 1139360 | 50552.2 |
| hypothetical protein | DEP83_04645 | Not Available | Positive | 1139488 - 1140210 | 26935.4 |
| llm class flavin-dependent oxidoreductase | DEP83_04650 | Not Available | Negative | 1140248 - 1141264 | 37535.8 |
| hypothetical protein | DEP83_04655 | Not Available | Positive | 1141441 - 1142463 | 38844.9 |
| serine/threonine protein phosphatase | DEP83_04660 | Not Available | Positive | 1142528 - 1144468 | 73584.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
