Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEP83_04360 | Not Available | Positive | 1074104 - 1075060 | 36388.6 |
| cupin domain-containing protein | DEP83_04365 | Not Available | Positive | 1075107 - 1075427 | 11866.0 |
| thiamine biosynthesis protein thij | DEP83_04370 | Not Available | Positive | 1075461 - 1076225 | 27847.4 |
| glyoxylate carboligase | DEP83_04375 | Not Available | Positive | 1076237 - 1077889 | 59947.9 |
| hypothetical protein | DEP83_04380 | Not Available | Positive | 1077910 - 1078470 | 20939.7 |
| n-acyl-d-glucosamine 2-epimerase | DEP83_04385 | Not Available | Positive | 1078480 - 1080318 | 71499.1 |
| anti-sigma b factor antagonist | DEP83_04390 | Not Available | Positive | 1080333 - 1080665 | 12242.9 |
| glycogen debranching enzyme glgx | DEP83_04395 | Not Available | Positive | 1080668 - 1082791 | 80879.9 |
| anti-anti-sigma factor | DEP83_04400 | Not Available | Positive | 1082816 - 1083136 | 11761.4 |
| anti-sigma regulatory factor | DEP83_04405 | Not Available | Positive | 1083138 - 1083572 | 16199.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
