Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease recj | DEP83_04095 | Not Available | Positive | 1023441 - 1025156 | 64476.2 |
| recq family atp-dependent dna helicase | DEP83_04100 | Not Available | Positive | 1025175 - 1027100 | 74128.4 |
| alpha/beta hydrolase | DEP83_04105 | Not Available | Positive | 1027187 - 1028179 | 38558.6 |
| hypothetical protein | DEP83_04110 | Not Available | Negative | 1028199 - 1029440 | 47824.1 |
| Trna-arg | Not Available | Not Available | Positive | 1029538 - 1029614 | Not Available |
| 50s ribosomal protein l13 | DEP83_04120 | Not Available | Positive | 1029902 - 1030357 | 17130.9 |
| 30s ribosomal protein s9 | DEP83_04125 | Not Available | Positive | 1030363 - 1030749 | 14467.7 |
| 30s ribosomal protein s2 | DEP83_04130 | Not Available | Positive | 1030953 - 1031810 | 31969.8 |
| elongation factor ts | DEP83_04135 | Not Available | Positive | 1031838 - 1032659 | 30031.1 |
| siderophore biosynthesis protein | DEP83_04140 | Not Available | Negative | 1032714 - 1033355 | 24633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
