Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 88 | DEP83_03495 | Not Available | Negative | 860677 - 861897 | 45850.8 |
| hypothetical protein | DEP83_03500 | Not Available | Negative | 861921 - 864371 | 92013.6 |
| hypothetical protein | DEP83_03505 | Not Available | Negative | 864420 - 866384 | 73989.5 |
| polygalacturonase | DEP83_03510 | Not Available | Negative | 866387 - 867946 | 57515.8 |
| hydrolase | DEP83_03515 | Not Available | Negative | 868035 - 870740 | 102376.0 |
| six-hairpin glycosidase | DEP83_03520 | Not Available | Negative | 870747 - 874067 | 128034.0 |
| arabinosidase | DEP83_03525 | Not Available | Negative | 874083 - 875012 | 35080.4 |
| ragb/susd family nutrient uptake outer membrane protein | DEP83_03530 | Not Available | Negative | 875204 - 876964 | 65646.6 |
| susc/raga family tonb-linked outer membrane protein | DEP83_03535 | Not Available | Negative | 876976 - 880092 | 114957.0 |
| endonuclease | DEP83_03540 | Not Available | Positive | 880442 - 881347 | 34585.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
