Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fes-binding protein | DEP83_03440 | Not Available | Negative | 847565 - 847792 | 8782.8 |
| hypothetical protein | DEP83_03445 | Not Available | Negative | 847874 - 848716 | 32188.8 |
| transcriptional repressor | DEP83_03450 | Not Available | Positive | 849050 - 849487 | 16479.2 |
| hypothetical protein | DEP83_03455 | Not Available | Negative | 849513 - 850301 | 30443.9 |
| hypothetical protein | DEP83_03460 | Not Available | Negative | 850298 - 850915 | 24772.7 |
| heavy metal translocating p-type atpase | DEP83_03465 | Not Available | Positive | 851063 - 853039 | 71379.0 |
| aminoacyl-trna hydrolase | DEP83_03470 | Not Available | Negative | 853110 - 853520 | 15608.7 |
| atpase | DEP83_03480 | Not Available | Negative | 853983 - 855305 | 51302.9 |
| alpha-rhamnosidase | DEP83_03485 | Not Available | Negative | 855428 - 859201 | 142259.0 |
| glycoside hydrolase | DEP83_03490 | Not Available | Negative | 859215 - 860669 | 56241.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
